RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 OR4Q2P0C623 313 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 CYP11B1P15538 503 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 FERP16591 822 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 TKTP29401 623 aaKnown RBP5.63□□□□□ -1.51
ATXN3-244ENST00000556898 RPL9P32969 192 aaKnown RBP5.63□□□□□ -1.51
ATXN3-244ENST00000556898 CTNNB1P35222 781 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 EIF4A3P38919 411 aaKnown RBP5.63□□□□□ -1.51
ATXN3-244ENST00000556898 PREPP48147 710 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 AARSP49588 968 aaKnown RBP eCLIP5.63□□□□□ -1.51
ATXN3-244ENST00000556898 NDUFV1P49821 464 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 ZNF132P52740 706 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 RAD23BP54727 409 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 VCPP55072 806 aaKnown RBP5.63□□□□□ -1.51
ATXN3-244ENST00000556898 PSMC1P62191 440 aaKnown RBP5.63□□□□□ -1.51
ATXN3-244ENST00000556898 GCNT1Q02742 428 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 GFPT1Q06210 699 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-244ENST00000556898 MYO1EQ12965 1108 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 TRIM14Q14142 442 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 MEA1Q16626 185 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 FAM171A1Q5VUB5 890 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 FUT10Q6P4F1 479 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 RSPO2Q6UXX9 243 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-244ENST00000556898 TOGARAM2Q6ZUX3 1019 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 LIMS2Q7Z4I7 341 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 PHLDB2Q86SQ0 1253 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 ACOT1Q86TX2 421 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 CCNJLQ8IV13 435 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 PASD1Q8IV76 773 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 CNGA4Q8IV77 575 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 FAM71AQ8IYT1 594 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 CMTR2Q8IYT2 770 aaKnown RBP5.63□□□□□ -1.51
ATXN3-244ENST00000556898 ADGRF2Q8IZF7 708 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 SLC39A11Q8N1S5 342 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 LRRC43Q8N309 656 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 C12orf29Q8N999 325 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 KLHL23Q8NBE8 558 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 COLGALT1Q8NBJ5 622 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 SLC4A11Q8NBS3 891 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 ACRBPQ8NEB7 543 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 AUTS2Q8WXX7 1259 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 NXPE3Q969Y0 559 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 MSLNLQ96KJ4 702 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 ZNF560Q96MR9 790 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 UROC1Q96N76 676 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 PANX2Q96RD6 677 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 TSPAN18Q96SJ8 248 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 TCF12Q99081 682 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 BAG1Q99933 345 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-244ENST00000556898 COLEC11Q9BWP8 271 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 PHF7Q9BWX1 381 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-244ENST00000556898 MRPL9Q9BYD2 267 aaKnown RBP5.63□□□□□ -1.51
ATXN3-244ENST00000556898 EDEM3Q9BZQ6 932 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 IMPG2Q9BZV3 1241 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 NHEJ1Q9H9Q4 299 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-244ENST00000556898 CRTAC1Q9NQ79 661 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 TLR9Q9NR96 1032 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 FAM49BQ9NUQ9 324 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 SPTLC3Q9NUV7 552 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 TMLHEQ9NVH6 421 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 GDAP2Q9NXN4 497 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 TAS2R14Q9NYV8 317 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 AIPL1Q9NZN9 384 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 PUF60Q9UHX1 559 aaKnown RBP5.63□□□□□ -1.51
ATXN3-244ENST00000556898 ADGRE2Q9UHX3 823 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 REXO2Q9Y3B8 237 aaKnown RBP5.63□□□□□ -1.51
ATXN3-244ENST00000556898 TRIP11Q15643 1979 aa5.63□□□□□ -1.51
ATXN3-244ENST00000556898 MYBPHLA2RUH7 354 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 A8MXQ7 604 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 TMCO5BA8MYB1 307 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 M0QZQ0 153 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 CLDN5O00501 218 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 LINC01565O15544 149 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 ADAM12O43184 909 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 THAP12O43422 761 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 HUS1O60921 280 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 TBX10O75333 385 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 EFEMP2O95967 443 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 WNT11O96014 354 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 SERPING1P05155 500 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 CCDC130P13994 396 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 CD19P15391 556 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 RPL17P18621 184 aaKnown RBP5.62□□□□□ -1.51
ATXN3-244ENST00000556898 WARSP23381 471 aaKnown RBP5.62□□□□□ -1.51
ATXN3-244ENST00000556898 TBXAS1P24557 533 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-244ENST00000556898 GNA15P30679 374 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 HNRNPH3P31942 346 aaKnown RBP5.62□□□□□ -1.51
ATXN3-244ENST00000556898 GTF2F1P35269 517 aaKnown RBP eCLIP5.62□□□□□ -1.51
ATXN3-244ENST00000556898 GNL1P36915 607 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-244ENST00000556898 PNPLA4P41247 253 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 NBL1P41271 181 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 MAPK8P45983 427 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 ID4P47928 161 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 GSDMDP57764 484 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 FMO1Q01740 532 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 CYP27A1Q02318 531 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 KLHL30Q0D2K2 578 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 INCA1Q0VD86 236 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 ASTE1Q2TB18 679 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-244ENST00000556898 C2CD6Q53TS8 623 aa5.62□□□□□ -1.51
ATXN3-244ENST00000556898 TDRD12Q587J7 1177 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms