RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 LONRF3Q496Y0 759 aa6.11□□□□□ -1.43
HIF1A-209ENST00000556827 COLEC12Q5KU26 742 aa6.11□□□□□ -1.43
HIF1A-209ENST00000556827 PRR5LQ6MZQ0 368 aa6.11□□□□□ -1.43
HIF1A-209ENST00000556827 CLEC4GQ6UXB4 293 aa6.11□□□□□ -1.43
HIF1A-209ENST00000556827 SESTD1Q86VW0 696 aa6.11□□□□□ -1.43
HIF1A-209ENST00000556827 LPIN2Q92539 896 aa6.11□□□□□ -1.43
HIF1A-209ENST00000556827 DPH1Q9BZG8 443 aa6.11□□□□□ -1.43
HIF1A-209ENST00000556827 LRRC27Q9C0I9 530 aa6.11□□□□□ -1.43
HIF1A-209ENST00000556827 IL17RBQ9NRM6 502 aa6.11□□□□□ -1.43
HIF1A-209ENST00000556827 ASB6Q9NWX5 421 aa6.11□□□□□ -1.43
HIF1A-209ENST00000556827 OGDHLQ9ULD0 1010 aa6.11□□□□□ -1.43
HIF1A-209ENST00000556827 NEU2Q9Y3R4 380 aa6.11□□□□□ -1.43
HIF1A-209ENST00000556827 N4BP2Q86UW6 1770 aaPredicted RBP6.11□□□□□ -1.43
HIF1A-209ENST00000556827 E7ENX8 843 aa6.1□□□□□ -1.43
HIF1A-209ENST00000556827 A1BGP04217 495 aa6.1□□□□□ -1.43
HIF1A-209ENST00000556827 THP07101 528 aa6.1□□□□□ -1.43
HIF1A-209ENST00000556827 MYL3P08590 195 aa6.1□□□□□ -1.43
HIF1A-209ENST00000556827 SRGNP10124 158 aa6.1□□□□□ -1.43
HIF1A-209ENST00000556827 TRIM27P14373 513 aa6.1□□□□□ -1.43
HIF1A-209ENST00000556827 PPP3CBP16298 524 aa6.1□□□□□ -1.43
HIF1A-209ENST00000556827 CTCFP49711 727 aaPredicted RBP6.1□□□□□ -1.43
HIF1A-209ENST00000556827 NDUFV1P49821 464 aa6.1□□□□□ -1.43
HIF1A-209ENST00000556827 TAP2Q03519 686 aa6.1□□□□□ -1.43
HIF1A-209ENST00000556827 CCDC181Q5TID7 509 aa6.1□□□□□ -1.43
HIF1A-209ENST00000556827 VPS53Q5VIR6 699 aa6.1□□□□□ -1.43
HIF1A-209ENST00000556827 KAZNQ674X7 775 aa6.1□□□□□ -1.43
HIF1A-209ENST00000556827 LMBRD2Q68DH5 695 aaPredicted RBP6.1□□□□□ -1.43
HIF1A-209ENST00000556827 VWA1Q6PCB0 445 aa6.1□□□□□ -1.43
HIF1A-209ENST00000556827 TMEM108Q6UXF1 575 aa6.1□□□□□ -1.43
HIF1A-209ENST00000556827 MICALCLQ6ZW33 695 aa6.1□□□□□ -1.43
HIF1A-209ENST00000556827 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.1□□□□□ -1.43
HIF1A-209ENST00000556827 TOR1AIP2Q8NFQ8 470 aa6.1□□□□□ -1.43
HIF1A-209ENST00000556827 ZNF287Q9HBT7 754 aa6.1□□□□□ -1.43
HIF1A-209ENST00000556827 HACL1Q9UJ83 578 aa6.1□□□□□ -1.43
HIF1A-209ENST00000556827 CORO2BQ9UQ03 480 aa6.1□□□□□ -1.43
HIF1A-209ENST00000556827 KIF7Q2M1P5 1343 aa6.09□□□□□ -1.43
HIF1A-209ENST00000556827 COL11A2P13942 1736 aaPredicted RBP6.09□□□□□ -1.43
HIF1A-209ENST00000556827 A0A087WWL8 130 aa6.09□□□□□ -1.43
HIF1A-209ENST00000556827 MYO1CO00159 1063 aa6.09□□□□□ -1.43
HIF1A-209ENST00000556827 PMM2O15305 246 aa6.09□□□□□ -1.43
HIF1A-209ENST00000556827 CAND2O75155 1236 aa6.09□□□□□ -1.43
HIF1A-209ENST00000556827 CAMTA2O94983 1202 aa6.09□□□□□ -1.43
HIF1A-209ENST00000556827 KRT18P05783 430 aaKnown RBP6.09□□□□□ -1.43
HIF1A-209ENST00000556827 CDK4P11802 303 aa6.09□□□□□ -1.43
HIF1A-209ENST00000556827 SLC5A1P13866 664 aa6.09□□□□□ -1.43
HIF1A-209ENST00000556827 ITGALP20701 1170 aa6.09□□□□□ -1.43
HIF1A-209ENST00000556827 RPS16P62249 146 aaKnown RBP6.09□□□□□ -1.43
HIF1A-209ENST00000556827 HLXQ14774 488 aaPredicted RBP6.09□□□□□ -1.43
HIF1A-209ENST00000556827 IQCB1Q15051 598 aa6.09□□□□□ -1.43
HIF1A-209ENST00000556827 SAFBQ15424 915 aaKnown RBP eCLIP6.09□□□□□ -1.43
HIF1A-209ENST00000556827 RBM20Q5T481 1227 aaKnown RBP6.09□□□□□ -1.43
HIF1A-209ENST00000556827 DCAF12L1Q5VU92 463 aa6.09□□□□□ -1.43
HIF1A-209ENST00000556827 NOL8Q76FK4 1167 aaKnown RBP6.09□□□□□ -1.43
HIF1A-209ENST00000556827 GRASPQ7Z6J2 395 aaPredicted RBP6.09□□□□□ -1.43
HIF1A-209ENST00000556827 ZNF280BQ86YH2 543 aa6.09□□□□□ -1.43
HIF1A-209ENST00000556827 IL17REQ8NFR9 667 aa6.09□□□□□ -1.43
HIF1A-209ENST00000556827 OR56A3Q8NH54 315 aa6.09□□□□□ -1.43
HIF1A-209ENST00000556827 TFAP2BQ92481 460 aa6.09□□□□□ -1.43
HIF1A-209ENST00000556827 NYXQ9GZU5 481 aa6.09□□□□□ -1.43
HIF1A-209ENST00000556827 MS4A7Q9GZW8 240 aaPredicted RBP6.09□□□□□ -1.43
HIF1A-209ENST00000556827 COL20A1Q9P218 1284 aa6.09□□□□□ -1.43
HIF1A-209ENST00000556827 NIP7Q9Y221 180 aaKnown RBP eCLIP6.09□□□□□ -1.43
HIF1A-209ENST00000556827 CEP350Q5VT06 3117 aa6.09□□□□□ -1.43
HIF1A-209ENST00000556827 KIF13BQ9NQT8 1826 aa6.09□□□□□ -1.44
HIF1A-209ENST00000556827 GOLGB1Q14789 3259 aaKnown RBP6.08□□□□□ -1.44
HIF1A-209ENST00000556827 A0A0B4J269 797 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 CCDC151A5D8V7 595 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 LRRC3CA6NJW4 275 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 ISM1B1AKI9 464 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 F8W8V4 182 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 hCG_1984214I3L0E3 225 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 C1QL1O75973 258 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 PRKAR2BP31323 418 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 EPHX2P34913 555 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 PIK3CBP42338 1070 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 MAP2K1Q02750 393 aaPredicted RBP6.08□□□□□ -1.44
HIF1A-209ENST00000556827 TUBB3Q13509 450 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 MAP9Q49MG5 647 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 LAYNQ6UX15 382 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 ZDHHC24Q6UX98 284 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 PEG10Q86TG7 708 aaKnown RBP6.08□□□□□ -1.44
HIF1A-209ENST00000556827 MICU3Q86XE3 530 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 PJA1Q8NG27 643 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 SUCLG2Q96I99 432 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 UROC1Q96N76 676 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 NAA15Q9BXJ9 866 aaKnown RBP6.08□□□□□ -1.44
HIF1A-209ENST00000556827 AMBRA1Q9C0C7 1298 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 TAF1DQ9H5J8 278 aaPredicted RBP6.08□□□□□ -1.44
HIF1A-209ENST00000556827 ARNT2Q9HBZ2 717 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 CPNE5Q9HCH3 593 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 ABT1Q9ULW3 272 aaKnown RBP6.08□□□□□ -1.44
HIF1A-209ENST00000556827 MRPS17Q9Y2R5 130 aaKnown RBP6.08□□□□□ -1.44
HIF1A-209ENST00000556827 USP16Q9Y5T5 823 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 SNX13Q9Y5W8 968 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 MRC1P22897 1456 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 COL5A3P25940 1745 aaPredicted RBP6.08□□□□□ -1.44
HIF1A-209ENST00000556827 WDR90Q96KV7 1748 aa6.08□□□□□ -1.44
HIF1A-209ENST00000556827 TNRC6CQ9HCJ0 1690 aaKnown RBP6.07□□□□□ -1.44
HIF1A-209ENST00000556827 TRIM43BA6NCK2 446 aa6.07□□□□□ -1.44
HIF1A-209ENST00000556827 MPPED1O15442 326 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms