RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 SLC30A10Q6XR72 485 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 USP49Q70CQ1 688 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 CLNKQ7Z7G1 428 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 TTC30AQ86WT1 665 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 CCDC28AQ8IWP9 274 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 SPARTQ8N0X7 666 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 PSD4Q8NDX1 1056 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 IL17REQ8NFR9 667 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 ZNF668Q96K58 619 aaPredicted RBP4.98□□□□□ -1.61
PRPF39-210ENST00000556718 PPM1MQ96MI6 270 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 HAPLN3Q96S86 360 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 VKORC1Q9BQB6 163 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 EIF2AK1Q9BQI3 630 aaKnown RBP4.98□□□□□ -1.61
PRPF39-210ENST00000556718 KRTAP2-2Q9BYT5 123 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 SEPSECSQ9HD40 501 aaKnown RBP4.98□□□□□ -1.61
PRPF39-210ENST00000556718 PDP2Q9P2J9 529 aa4.98□□□□□ -1.61
PRPF39-210ENST00000556718 A0A087WZ62 844 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 WDR27A2RRH5 827 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 HMX3A6NHT5 357 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 IPO5O00410 1097 aaKnown RBP4.97□□□□□ -1.61
PRPF39-210ENST00000556718 FCHO1O14526 889 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 RRP9O43818 475 aaKnown RBP4.97□□□□□ -1.61
PRPF39-210ENST00000556718 IGKV2-30P06310 120 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 PYGLP06737 847 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 SRGAP2BP0DMP2 458 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 PPP3CBP16298 524 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 CHRM3P20309 590 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 ITGALP20701 1170 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 MAN1A1P33908 653 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 CASP2P42575 452 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 GCLCP48506 637 aaPredicted RBP4.97□□□□□ -1.61
PRPF39-210ENST00000556718 RPS7P62081 194 aaKnown RBP4.97□□□□□ -1.61
PRPF39-210ENST00000556718 NPY5RQ15761 445 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 SLC5A9Q2M3M2 681 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 FBXO47Q5MNV8 452 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 FCRL6Q6DN72 434 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 KIAA0408Q6ZU52 694 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 NSUN7Q8NE18 718 aaKnown RBP4.97□□□□□ -1.61
PRPF39-210ENST00000556718 SEMA6DQ8NFY4 1073 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 SKA1Q96BD8 255 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 GRAMD1AQ96CP6 724 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 PGBD1Q96JS3 809 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 FCRL4Q96PJ5 515 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 PYM1Q9BRP8 204 aaKnown RBP4.97□□□□□ -1.61
PRPF39-210ENST00000556718 UNC45AQ9H3U1 944 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 ETAA1Q9NY74 926 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 DKK4Q9UBT3 224 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 SWAP70Q9UH65 585 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 GJD2Q9UKL4 321 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 TBC1D30Q9Y2I9 924 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 CDY1Q9Y6F8 540 aa4.97□□□□□ -1.61
PRPF39-210ENST00000556718 A0A1B0GVC2 190 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 TOR1BO14657 336 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 USP1O94782 785 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 ACTL6BO94805 426 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 SUN1O94901 812 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 BMP15O95972 392 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 HOXB6P17509 224 aaKnown RBP4.96□□□□□ -1.62
PRPF39-210ENST00000556718 XBP1P17861 261 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 PRKAR1BP31321 381 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 SLC5A2P31639 672 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 GEMIN4P57678 1058 aaKnown RBP4.96□□□□□ -1.62
PRPF39-210ENST00000556718 LILRA4P59901 499 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 AP2B1P63010 937 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 SLC10A2Q12908 348 aaPredicted RBP4.96□□□□□ -1.62
PRPF39-210ENST00000556718 DYRK1AQ13627 763 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 TRIM71Q2Q1W2 868 aaKnown RBP4.96□□□□□ -1.62
PRPF39-210ENST00000556718 ZNF750Q32MQ0 723 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 PREPLQ4J6C6 727 aaPredicted RBP4.96□□□□□ -1.62
PRPF39-210ENST00000556718 TMTC4Q5T4D3 741 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 INTS11Q5TA45 600 aaKnown RBP4.96□□□□□ -1.62
PRPF39-210ENST00000556718 SFRP4Q6FHJ7 346 aaPredicted RBP4.96□□□□□ -1.62
PRPF39-210ENST00000556718 TAF2Q6P1X5 1199 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 RINLQ6ZS11 566 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 MAATS1Q7Z4T9 603 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 PCGF5Q86SE9 256 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 C2CD5Q86YS7 1000 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 RASGRP3Q8IV61 690 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 FTSJ3Q8IY81 847 aaKnown RBP4.96□□□□□ -1.62
PRPF39-210ENST00000556718 NRSN1Q8IZ57 195 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 ADGRG5Q8IZF4 528 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 STT3BQ8TCJ2 826 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 SPPL3Q8TCT6 385 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 BPIFB1Q8TDL5 484 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 OTUD7AQ8TE49 926 aaPredicted RBP4.96□□□□□ -1.62
PRPF39-210ENST00000556718 LRIG1Q96JA1 1093 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 SLC25A32Q9H2D1 315 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 SERGEFQ9UGK8 458 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 FBXO9Q9UK97 447 aaPredicted RBP4.96□□□□□ -1.62
PRPF39-210ENST00000556718 HPSEQ9Y251 543 aa4.96□□□□□ -1.62
PRPF39-210ENST00000556718 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.96□□□□□ -1.62
PRPF39-210ENST00000556718 E7ENX8 843 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 J3KRW8 73 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 DCLK1O15075 740 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 SNX2O60749 519 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 SRGAP2O75044 1071 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 VIPP01282 170 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 PECAM1P16284 738 aaPredicted RBP4.95□□□□□ -1.62
PRPF39-210ENST00000556718 KELP23276 732 aa4.95□□□□□ -1.62
PRPF39-210ENST00000556718 CST5P28325 142 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms