RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 AMPD1P23109 780 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 FOXN2P32314 431 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 MAP3K7CLP57077 242 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 WDR4P57081 412 aaKnown RBP10.52□□□□□ -0.73
TMEM260-211ENST00000556648 SPATS2Q86XZ4 545 aaKnown RBP10.52□□□□□ -0.73
TMEM260-211ENST00000556648 TDRPQ86YL5 185 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 RIBC1Q8N443 379 aaPredicted RBP10.52□□□□□ -0.73
TMEM260-211ENST00000556648 OTUD6BQ8N6M0 293 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 ATP11CQ8NB49 1132 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 RNF169Q8NCN4 708 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 CKAP2Q8WWK9 683 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 FAM149B1Q96BN6 582 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 RTP4Q96DX8 246 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 TNIP3Q96KP6 325 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 HSFY1Q96LI6 401 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 UPF3AQ9H1J1 476 aaKnown RBP10.52□□□□□ -0.73
TMEM260-211ENST00000556648 TSPYL2Q9H2G4 693 aaPredicted RBP10.52□□□□□ -0.73
TMEM260-211ENST00000556648 TRABDQ9H4I3 376 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 RAB6BQ9NRW1 208 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 KRT82Q9NSB4 513 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 GGA2Q9UJY4 613 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 GRID1Q9ULK0 1009 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 USP3Q9Y6I4 520 aa10.52□□□□□ -0.73
TMEM260-211ENST00000556648 BCLAF3A2AJT9 711 aaKnown RBP10.51□□□□□ -0.73
TMEM260-211ENST00000556648 MYBPHLA2RUH7 354 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 AMHP03971 560 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 VAV1P15498 845 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 NPR3P17342 541 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 CCND3P30281 292 aaPredicted RBP10.51□□□□□ -0.73
TMEM260-211ENST00000556648 CD52P31358 61 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 SCNN1AP37088 669 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 MATKP42679 507 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 ACADSBP45954 432 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 FLT3LGP49771 235 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 SNX16P57768 344 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 YWHAZP63104 245 aaKnown RBP10.51□□□□□ -0.73
TMEM260-211ENST00000556648 PRKCZQ05513 592 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 PAN2Q504Q3 1202 aaKnown RBP10.51□□□□□ -0.73
TMEM260-211ENST00000556648 SYPL2Q5VXT5 272 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 NCBP2-AS2Q69YL0 99 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 AGMOQ6ZNB7 445 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 C3orf62Q6ZUJ4 267 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 PIGWQ7Z7B1 504 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 SERINC5Q86VE9 423 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 CABS1Q96KC9 395 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 SMOQ99835 787 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 TRIM56Q9BRZ2 755 aaKnown RBP10.51□□□□□ -0.73
TMEM260-211ENST00000556648 RASSF4Q9H2L5 321 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 DDX43Q9NXZ2 648 aaKnown RBP10.51□□□□□ -0.73
TMEM260-211ENST00000556648 PSMC3IPQ9P2W1 217 aaPredicted RBP10.51□□□□□ -0.73
TMEM260-211ENST00000556648 FZD10Q9ULW2 581 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 ARL5CA6NH57 179 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 KBTBD13C9JR72 458 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 NDC80O14777 642 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 MFSD11O43934 449 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 METTL18O95568 372 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 OAS1P00973 400 aaKnown RBP10.51□□□□□ -0.73
TMEM260-211ENST00000556648 GHRP10912 638 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 KRT15P19012 456 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 STIP1P31948 543 aaKnown RBP10.51□□□□□ -0.73
TMEM260-211ENST00000556648 GEMIN4P57678 1058 aaKnown RBP10.51□□□□□ -0.73
TMEM260-211ENST00000556648 MRPS5P82675 430 aaKnown RBP10.51□□□□□ -0.73
TMEM260-211ENST00000556648 DCAF6Q58WW2 860 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 CGB2Q6NT52 195 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 FAM35AQ86V20 835 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 MICALL1Q8N3F8 863 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 CCDC197Q8NCU1 140 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 ZMIZ2Q8NF64 920 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 ADAM32Q8TC27 787 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 DCAKDQ8WVC6 231 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 SPOCK2Q92563 424 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 CFAP36Q96G28 342 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 QKIQ96PU8 341 aaKnown RBP eCLIP10.51□□□□□ -0.73
TMEM260-211ENST00000556648 TSPAN18Q96SJ8 248 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 PAFAH2Q99487 392 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 PAIP2Q9BPZ3 127 aaKnown RBP10.51□□□□□ -0.73
TMEM260-211ENST00000556648 SYT15Q9BQS2 421 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 DHRS4Q9BTZ2 278 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 ULBP1Q9BZM6 244 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 PHACTR1Q9C0D0 580 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 ACSS3Q9H6R3 686 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 PLAC1Q9HBJ0 212 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 ETNK1Q9HBU6 452 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 CYLDQ9NQC7 956 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 ANLNQ9NQW6 1124 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 PAK5Q9P286 719 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 ACTL7BQ9Y614 415 aa10.51□□□□□ -0.73
TMEM260-211ENST00000556648 FAM47DPA6NHR8 397 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 DNM1LO00429 736 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 CHADO15335 359 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 ADAMTS4O75173 837 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 FYNP06241 537 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 THP07101 528 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 STX2P32856 288 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 THPOP40225 353 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 TKTL1P51854 596 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 CACNB2Q08289 660 aaPredicted RBP10.5□□□□□ -0.73
TMEM260-211ENST00000556648 SLC1A5Q15758 541 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 SLC25A52Q3SY17 297 aa10.5□□□□□ -0.73
TMEM260-211ENST00000556648 SLC45A4Q5BKX6 768 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms