RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 HSF5Q4G112 596 aaPredicted RBP11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 PPM1JQ5JR12 505 aa11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 C11orf74Q86VG3 221 aa11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 RASSF3Q86WH2 238 aa11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 TERB1Q8NA31 727 aa11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 SLC4A11Q8NBS3 891 aa11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 ENGASEQ8NFI3 743 aa11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 FAXDC2Q96IV6 333 aa11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 CDK5RAP1Q96SZ6 601 aaKnown RBP11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 GTPBP4Q9BZE4 634 aaKnown RBP11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 WDR35Q9P2L0 1181 aa11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 STRIP2Q9ULQ0 834 aa11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 NUP205Q92621 2012 aa11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 RIF1Q5UIP0 2472 aaKnown RBP11.12□□□□□ -0.63
SPTLC2-205ENST00000556607 DMXL1Q9Y485 3027 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 A0A0A0MRY4 1105 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 HOXB2P14652 356 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 BCKDHBP21953 392 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 KIR2DL1P43626 348 aaPredicted RBP11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 TKTL1P51854 596 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 YWHAGP61981 247 aaKnown RBP eCLIP11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 COG7P83436 770 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 CUL2Q13617 745 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 BYSLQ13895 437 aaKnown RBP11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 COBLL1Q53SF7 1204 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 SGO2Q562F6 1265 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 PMS2CLQ68D20 193 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 RNF43Q68DV7 783 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 TCEAL6Q6IPX3 200 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 ARMCX6Q7L4S7 300 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 CCDC186Q7Z3E2 898 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 CYP2U1Q7Z449 544 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 PIGZQ86VD9 579 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 ETFBKMTQ8IXQ9 262 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 CHPFQ8IZ52 775 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 ARHGAP18Q8N392 663 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 DDX1Q92499 740 aaKnown RBP11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 PIGKQ92643 395 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 TCEAL3Q969E4 200 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 TIGD1Q96MW7 591 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 IPO9Q96P70 1041 aaKnown RBP11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 LRRC4Q9HBW1 653 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 METTL14Q9HCE5 456 aaKnown RBP11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 RXFP3Q9NSD7 469 aa11.11□□□□□ -0.63
SPTLC2-205ENST00000556607 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 SLC12A8A0AV02 714 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 BCLAF3A2AJT9 711 aaKnown RBP11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 BIN1O00499 593 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 STC2O76061 302 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 CYBBP04839 570 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 HNRNPLP14866 589 aaKnown RBP eCLIP11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 TBXAS1P24557 533 aaPredicted RBP11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 NTSR1P30989 418 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 CORO1AP31146 461 aaKnown RBP11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 CHKAP35790 457 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 PPP1R2P41236 205 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 BCAT1P54687 386 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 CETN1Q12798 172 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 PLA2G2CQ5R387 149 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 STPG1Q5TH74 334 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 ARHGAP17Q68EM7 881 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 KLHDC10Q6PID8 442 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 LPCAT2Q7L5N7 544 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 SCD5Q86SK9 330 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 CREBRFQ8IUR6 639 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 TMEFF1Q8IYR6 380 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 PHTF2Q8N3S3 785 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 ANKRD52Q8NB46 1076 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 UBA3Q8TBC4 463 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 DHTKD1Q96HY7 919 aaPredicted RBP11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 DUSP9Q99956 384 aaKnown RBP11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 EDEM2Q9BV94 578 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 ULBP1Q9BZM6 244 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 DCLK3Q9C098 648 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 CLIC5Q9NZA1 410 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 MAN1B1Q9UKM7 699 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 TSPAN16Q9UKR8 245 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 ZNF510Q9Y2H8 683 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 PCDHB4Q9Y5E5 795 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 USP3Q9Y6I4 520 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 OTOGLQ3ZCN5 2332 aa11.1□□□□□ -0.63
SPTLC2-205ENST00000556607 BICDL2A1A5D9 508 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 KHNYNO15037 678 aaKnown RBP11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 CACNG3O60359 315 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 GREM1O60565 184 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 ADAM23O75077 832 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 ZBED1O96006 694 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 VDRP11473 427 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 LCP1P13796 627 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 CD44P16070 742 aaKnown RBP11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 P2RY2P41231 377 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 FMO5P49326 533 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 PDE4CQ08493 712 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 BST2Q10589 180 aaKnown RBP11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 EGFLAMQ63HQ2 1017 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 TMEM270Q6UE05 265 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 TOGARAM2Q6ZUX3 1019 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 DENND1CQ8IV53 801 aa11.09□□□□□ -0.63
SPTLC2-205ENST00000556607 SIX6OS1Q8N1H7 587 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms