RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 TBX3O15119 743 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 CEP104O60308 925 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 CLASP2O75122 1294 aaKnown RBP4.71□□□□□ -1.66
ATXN3-241ENST00000556374 GFPT2O94808 682 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 GCNT3O95395 438 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 FOSP01100 380 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-241ENST00000556374 H2AFZP0C0S5 128 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 IL1R1P14778 569 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 RPS19P39019 145 aaKnown RBP4.71□□□□□ -1.66
ATXN3-241ENST00000556374 STAT1P42224 750 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 GUCY2FP51841 1108 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 EIF3BP55884 814 aaKnown RBP4.71□□□□□ -1.66
ATXN3-241ENST00000556374 RAC3P60763 192 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 GPSM2P81274 684 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 CETN1Q12798 172 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 PDCLQ13371 301 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 LRRC41Q15345 812 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 STILQ15468 1287 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 EXOC3L4Q17RC7 722 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 ZCWPW2Q504Y3 356 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 ODF2Q5BJF6 829 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 CEP85LQ5SZL2 805 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 HYIQ5T013 277 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 RNF187Q5TA31 235 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-241ENST00000556374 TCTN3Q6NUS6 607 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 ZNF585AQ6P3V2 769 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 KCNT2Q6UVM3 1135 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 MOXD1Q6UVY6 613 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 MOB2Q70IA6 237 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 H2AFVQ71UI9 128 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 PEX26Q7Z412 305 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 POLNQ7Z5Q5 900 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 CROCCP2Q86T23 111 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 CD302Q8IX05 232 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 KLHL7Q8IXQ5 586 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 ADGRF4Q8IZF3 695 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 ANKRD13CQ8N6S4 541 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 AMER2Q8N7J2 671 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 STPG3Q8N7X2 389 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 UBLCP1Q8WVY7 318 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-241ENST00000556374 CTNNBL1Q8WYA6 563 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-241ENST00000556374 RIN2Q8WYP3 895 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-241ENST00000556374 TEKT1Q969V4 418 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 ZBTB9Q96C00 473 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 NEIL1Q96FI4 390 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-241ENST00000556374 RUNDC3BQ96NL0 473 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 CEP89Q96ST8 783 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 SH3GL2Q99962 352 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 HTATIP2Q9BUP3 242 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 NSRP1Q9H0G5 558 aaKnown RBP4.71□□□□□ -1.66
ATXN3-241ENST00000556374 CPVLQ9H3G5 476 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 PLEKHA4Q9H4M7 779 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 SLITRK6Q9H5Y7 841 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 ACTR5Q9H9F9 607 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-241ENST00000556374 FAM114A2Q9NRY5 505 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 TYW1Q9NV66 732 aaKnown RBP4.71□□□□□ -1.66
ATXN3-241ENST00000556374 SEPT11Q9NVA2 429 aaKnown RBP4.71□□□□□ -1.66
ATXN3-241ENST00000556374 TMEM51Q9NW97 253 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 AURKAIP1Q9NWT8 199 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-241ENST00000556374 MTMR4Q9NYA4 1195 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 TBC1D7Q9P0N9 293 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 GCNT4Q9P109 453 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 TCEAL9Q9UHQ7 104 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 AMFRQ9UKV5 643 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 INTUQ9ULD6 942 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 NFU1Q9UMS0 254 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 SRPK3Q9UPE1 567 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 ZFR2Q9UPR6 939 aaKnown RBP4.71□□□□□ -1.66
ATXN3-241ENST00000556374 DNM3Q9UQ16 869 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 FRMD4BQ9Y2L6 1034 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 UTP11Q9Y3A2 253 aaKnown RBP4.71□□□□□ -1.66
ATXN3-241ENST00000556374 NOC2LQ9Y3T9 749 aaKnown RBP4.71□□□□□ -1.66
ATXN3-241ENST00000556374 NR2E3Q9Y5X4 410 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 PTCH2Q9Y6C5 1203 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 FAM169AQ9Y6X4 670 aa4.71□□□□□ -1.66
ATXN3-241ENST00000556374 ASTN2O75129 1339 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-241ENST00000556374 COL2A1P02458 1487 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-241ENST00000556374 A0A0A6YYK5 440 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-241ENST00000556374 E9PMD0 336 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 ARVCFO00192 962 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 ZNF263O14978 683 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 EPHB6O15197 1021 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 EIF3DO15371 548 aaKnown RBP eCLIP4.7□□□□□ -1.66
ATXN3-241ENST00000556374 BBOX1O75936 387 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 NR3C1P04150 777 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 SNHG28P0DPA3 235 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 MYBL2P10244 700 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 COL6A2P12110 1019 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 KRT13P13646 458 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 AKR1B1P15121 316 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 PTPN1P18031 435 aaKnown RBP4.7□□□□□ -1.66
ATXN3-241ENST00000556374 COMTP21964 271 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 CTNNA1P35221 906 aaKnown RBP4.7□□□□□ -1.66
ATXN3-241ENST00000556374 NOVP48745 357 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 SUMO1P63165 101 aaKnown RBP4.7□□□□□ -1.66
ATXN3-241ENST00000556374 GABREP78334 506 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 MYL7Q01449 175 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 DRP2Q13474 957 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 PLCB4Q15147 1175 aa4.7□□□□□ -1.66
ATXN3-241ENST00000556374 CDC37Q16543 378 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms