RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 ST3GAL1Q11201 340 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 DUSP4Q13115 394 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 AUHQ13825 339 aaKnown RBP9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 SLC10A6Q3KNW5 377 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 BBS9Q3SYG4 887 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 VITQ6UXI7 678 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 PRR23BQ6ZRT6 265 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 KRTAP1-3Q8IUG1 177 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 MFSD6LQ8IWD5 586 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 OXR1Q8N573 874 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 IGSF22Q8N9C0 903 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 LEMD2Q8NC56 503 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 SECISBP2LQ93073 1101 aaKnown RBP9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 ACAP3Q96P50 834 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 G6PC3Q9BUM1 346 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 GPR88Q9GZN0 384 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 RNF32Q9H0A6 362 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 CDT1Q9H211 546 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 BHMT2Q9H2M3 363 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 BRD9Q9H8M2 597 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 C17orf75Q9HAS0 396 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 CYP4F11Q9HBI6 524 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 PARD6AQ9NPB6 346 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 TOPORSQ9NS56 1045 aaPredicted RBP9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 CEP72Q9P209 647 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 ARHGAP28Q9P2N2 729 aa9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 AFF4Q9UHB7 1163 aaKnown RBP9.75□□□□□ -0.85
GTF2A1-204ENST00000556268 TMEM82A0PJX8 343 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 FITM1A5D6W6 292 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 PODXLO00592 558 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 PRRG1O14668 218 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 SHOXO15266 292 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 LRP3O75074 770 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 VNN2O95498 520 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 SYPP08247 313 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 MCF2P10911 925 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 RPL10P27635 214 aaKnown RBP9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 TRAPPC10P48553 1259 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 MESP2Q0VG99 397 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 TRIM29Q14134 588 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 ZBTB6Q15916 424 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 CYP4A22Q5TCH4 519 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 UNC5AQ6ZN44 842 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 C1orf186Q6ZWK4 172 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 FBXO18Q8NFZ0 1043 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 FAM3CQ92520 227 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 KCNN1Q92952 543 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 C18orf25Q96B23 403 aaPredicted RBP9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 ZNF512Q96ME7 567 aaPredicted RBP9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 RTKNQ9BST9 563 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 CCDC94Q9BW85 323 aaPredicted RBP9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 TARS2Q9BW92 718 aaKnown RBP9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 MRPL4Q9BYD3 311 aaKnown RBP9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 KCNG1Q9UIX4 513 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 INSL5Q9Y5Q6 135 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 PHLPP2Q6ZVD8 1323 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 KMT2BQ9UMN6 2715 aaPredicted RBP9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 MIA3Q5JRA6 1907 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 TRIP11Q15643 1979 aa9.74□□□□□ -0.85
GTF2A1-204ENST00000556268 M0QZQ0 153 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 PAPSS2O95340 614 aaPredicted RBP9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 RETP07949 1114 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 GDI1P31150 447 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 HOXA6P31267 233 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 CCT6AP40227 531 aaKnown RBP9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 VIPR2P41587 438 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 CXCL12P48061 93 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 TOB1P50616 345 aaPredicted RBP9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 NEK4P51957 841 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 PEX3P56589 373 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 MAPK7Q13164 816 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 SAFBQ15424 915 aaKnown RBP eCLIP9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 IL17AQ16552 155 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 HAUS3Q68CZ6 603 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 LAIR1Q6GTX8 287 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 RINT1Q6NUQ1 792 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 PDZD4Q76G19 769 aaPredicted RBP9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 SPEM1Q8N4L4 309 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 APPL2Q8NEU8 664 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 DEPDC1BQ8WUY9 529 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 E2F7Q96AV8 911 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 ZBTB45Q96K62 511 aaPredicted RBP9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 LRRC3BQ96PB8 259 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 LLPHQ9BRT6 129 aaKnown RBP9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 TGIF2Q9GZN2 237 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 ACBD3Q9H3P7 528 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 LRWD1Q9UFC0 647 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 DNM3Q9UQ16 869 aa9.73□□□□□ -0.85
GTF2A1-204ENST00000556268 SSU72P8A0A1W2PR75 194 aa9.72□□□□□ -0.85
GTF2A1-204ENST00000556268 CCDC169A6NNP5 214 aa9.72□□□□□ -0.85
GTF2A1-204ENST00000556268 HEPACAM2A8MVW5 462 aa9.72□□□□□ -0.85
GTF2A1-204ENST00000556268 ZNF263O14978 683 aa9.72□□□□□ -0.85
GTF2A1-204ENST00000556268 CHADO15335 359 aa9.72□□□□□ -0.85
GTF2A1-204ENST00000556268 HIP1RO75146 1068 aa9.72□□□□□ -0.85
GTF2A1-204ENST00000556268 KRT37O76014 449 aa9.72□□□□□ -0.85
GTF2A1-204ENST00000556268 ADRB2P07550 413 aa9.72□□□□□ -0.85
GTF2A1-204ENST00000556268 U2AF2P26368 475 aaKnown RBP eCLIP9.72□□□□□ -0.85
GTF2A1-204ENST00000556268 CNR2P34972 360 aa9.72□□□□□ -0.85
GTF2A1-204ENST00000556268 CTSKP43235 329 aa9.72□□□□□ -0.85
GTF2A1-204ENST00000556268 AARSP49588 968 aaKnown RBP eCLIP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms