RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 AGXT2Q9BYV1 514 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 CDT1Q9H211 546 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 KIF9Q9HAQ2 790 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 NCOA5Q9HCD5 579 aaKnown RBP7.42□□□□□ -1.22
ATXN3-236ENST00000556220 DUS2Q9NX74 493 aaKnown RBP7.42□□□□□ -1.22
ATXN3-236ENST00000556220 KIAA1522Q9P206 1035 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-236ENST00000556220 ADGRE2Q9UHX3 823 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 MMP17Q9ULZ9 603 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 KCNJ14Q9UNX9 436 aa7.42□□□□□ -1.22
ATXN3-236ENST00000556220 PLXNB3Q9ULL4 1909 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 TENM4Q6N022 2769 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 ANTXRLA6NF34 631 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 J3QKU1 62 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 K7ERI5 159 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 CBFA2T3O75081 653 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 GJB3O75712 270 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 SYPP08247 313 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 TYMPP19971 482 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 HSPA4P34932 840 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 AARSP49588 968 aaKnown RBP eCLIP7.41□□□□□ -1.22
ATXN3-236ENST00000556220 EVCP57679 992 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 MRPS21P82921 87 aaKnown RBP7.41□□□□□ -1.22
ATXN3-236ENST00000556220 MAP7Q14244 749 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 MTF1Q14872 753 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 VEPH1Q14D04 833 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 TAF12Q16514 161 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 ECM1Q16610 540 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 ZNF568Q3ZCX4 644 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 TXNDC8Q6A555 127 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 PIK3AP1Q6ZUJ8 805 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 GLRX5Q86SX6 157 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 MON1AQ86VX9 555 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 CCDC33Q8N5R6 958 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 GIPC2Q8TF65 315 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 ATP2A3Q93084 1043 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 IFT74Q96LB3 600 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 AIFM3Q96NN9 605 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 CITED4Q96RK1 184 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 SEPT5Q99719 369 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-236ENST00000556220 TTC12Q9H892 705 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-236ENST00000556220 CCDC39Q9UFE4 941 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 RNF114Q9Y508 228 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 ATXN2Q99700 1313 aaKnown RBP7.41□□□□□ -1.22
ATXN3-236ENST00000556220 CABIN1Q9Y6J0 2220 aa7.41□□□□□ -1.22
ATXN3-236ENST00000556220 USP9XQ93008 2570 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-236ENST00000556220 COL6A6A6NMZ7 2263 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-236ENST00000556220 TRABD2BA6NFA1 517 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 CYP26A1O43174 497 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 AP5Z1O43299 807 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 NDUFB5O43674 189 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 B3GALT4O96024 378 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 MCF2P10911 925 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 HMGA1P17096 107 aaKnown RBP7.4□□□□□ -1.22
ATXN3-236ENST00000556220 ATF6P18850 670 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 PROZP22891 400 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 LRPAP1P30533 357 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 ADMP35318 185 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 ABCG1P45844 678 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 FAM160A1Q05DH4 1040 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 ZNF33AQ06730 810 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 DMP1Q13316 513 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-236ENST00000556220 CALCRLQ16602 461 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 SLC10A6Q3KNW5 377 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 MGAT5BQ3V5L5 792 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 EARS2Q5JPH6 523 aaKnown RBP7.4□□□□□ -1.22
ATXN3-236ENST00000556220 OVOS1Q6IE37 1185 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 DSTYKQ6XUX3 929 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 CATSPER3Q86XQ3 398 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 NAXDQ8IW45 347 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 SHISA5Q8N114 240 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 DEFB119Q8N690 84 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 MRPS31Q92665 395 aaKnown RBP7.4□□□□□ -1.22
ATXN3-236ENST00000556220 KCNB2Q92953 911 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 LINC00597Q9H2U6 94 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 PRORYQ9H606 182 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 POLD4Q9HCU8 107 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 RAD18Q9NS91 495 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 TUBGCP4Q9UGJ1 667 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 ACTL7BQ9Y614 415 aa7.4□□□□□ -1.22
ATXN3-236ENST00000556220 TRIP11Q15643 1979 aa7.4□□□□□ -1.23
ATXN3-236ENST00000556220 SHROOM3Q8TF72 1996 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 A0A1W2PQD8 194 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 SGK1O00141 431 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 ABLIM1O14639 778 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 CPLX1O14810 134 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 CPNE3O75131 537 aaKnown RBP7.39□□□□□ -1.23
ATXN3-236ENST00000556220 HAPLN1P10915 354 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-236ENST00000556220 CYP3A5P20815 502 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 RPS6KB1P23443 525 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 NMT1P30419 496 aaKnown RBP7.39□□□□□ -1.23
ATXN3-236ENST00000556220 OPRD1P41143 372 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 IFNAR2P48551 515 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 CYP27A1Q02318 531 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 RPL6Q02878 288 aaKnown RBP7.39□□□□□ -1.23
ATXN3-236ENST00000556220 SMARCB1Q12824 385 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 ZBTB6Q15916 424 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 ZNF77Q15935 545 aa7.39□□□□□ -1.23
ATXN3-236ENST00000556220 HSF5Q4G112 596 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-236ENST00000556220 SLC39A12Q504Y0 691 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms