RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 MARC1Q5VT66 337 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 LRRC38Q5VT99 294 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 USP50Q70EL3 339 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-216ENST00000556083 ZNF655Q8N720 491 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-216ENST00000556083 FAM71DQ8N9W8 422 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 CNDP1Q96KN2 507 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 TUT1Q9H6E5 874 aaKnown RBP11.04□□□□□ -0.64
ACTN1-216ENST00000556083 ZSCAN5CA6NGD5 496 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-216ENST00000556083 PDE2AO00408 941 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-216ENST00000556083 RAD51BO15315 384 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 AMHP03971 560 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 PABPC1P11940 636 aaKnown RBP11.04□□□□□ -0.64
ACTN1-216ENST00000556083 MAPK9P45984 424 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 CACNB2Q08289 660 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-216ENST00000556083 CHI3L2Q15782 390 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 LONRF1Q17RB8 773 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 TRMT5Q32P41 509 aaKnown RBP11.04□□□□□ -0.64
ACTN1-216ENST00000556083 SLC45A4Q5BKX6 768 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 RAD9BQ6WBX8 426 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 SPOCD1Q6ZMY3 1216 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 CCDC149Q6ZUS6 474 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 USP33Q8TEY7 942 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 CAVIN3Q969G5 261 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 TMEM39BQ9GZU3 492 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 ZNF229Q9UJW7 825 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 PCDHA3Q9Y5H8 950 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 IQSEC2Q5JU85 1478 aa11.04□□□□□ -0.64
ACTN1-216ENST00000556083 MAGEA13PA6NCF6 341 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 CNOT3O75175 753 aaKnown RBP11.03□□□□□ -0.64
ACTN1-216ENST00000556083 PARNO95453 639 aaKnown RBP11.03□□□□□ -0.64
ACTN1-216ENST00000556083 EPHX2P34913 555 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 GP5P40197 560 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 BRSK2Q8IWQ3 736 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 LRRC71Q8N4P6 559 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 FTHL17Q9BXU8 183 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 MRPS26Q9BYN8 205 aaKnown RBP11.03□□□□□ -0.64
ACTN1-216ENST00000556083 RPS6KB2Q9UBS0 482 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 USP18Q9UMW8 372 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 HPS5Q9UPZ3 1129 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 TTLL13PA6NNM8 815 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 UQCRBP14927 111 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 CXCR2P25025 360 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 IRX1P78414 480 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-216ENST00000556083 PCSK7Q16549 785 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 ZFP1Q6P2D0 407 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 MICU2Q8IYU8 434 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 SYTL5Q8TDW5 730 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-216ENST00000556083 ATL1Q8WXF7 558 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 SYT15Q9BQS2 421 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 THTPAQ9BU02 230 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 RTFDC1Q9BY42 306 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-216ENST00000556083 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.03□□□□□ -0.64
ACTN1-216ENST00000556083 NCKAP1Q9Y2A7 1128 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 SUPT7LO94864 414 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 FGF19O95750 216 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 IGSF6O95976 241 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 HMBSP08397 361 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 CD151P48509 253 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 SEC23AQ15436 765 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 PTGISQ16647 500 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 PPP1R15BQ5SWA1 713 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 ERMARDQ5T6L9 678 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 ATAD3BQ5T9A4 648 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 LYPLAL1Q5VWZ2 237 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 NEK5Q6P3R8 708 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 BNC2Q6ZN30 1099 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-216ENST00000556083 SRLQ86TD4 932 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 PRPF39Q86UA1 669 aaKnown RBP11.03□□□□□ -0.64
ACTN1-216ENST00000556083 SLC25A41Q8N5S1 370 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 SETD9Q8NE22 299 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 FAM172AQ8WUF8 416 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 PPP1R16AQ96I34 528 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 DCLRE1BQ9H816 532 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 ENTPD7Q9NQZ7 604 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 KRT84Q9NSB2 600 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 INTS13Q9NVM9 706 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 RABGEF1Q9UJ41 708 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 NWD1Q149M9 1564 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 FRMPD4Q14CM0 1322 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 MYO1GB0I1T2 1018 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 F8VZ95 297 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 TBC1D12O60347 775 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 KLHL41O60662 606 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 VIL1P09327 827 aaKnown RBP11.03□□□□□ -0.64
ACTN1-216ENST00000556083 OR56A5P0C7T3 313 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 DARSP14868 501 aaKnown RBP11.03□□□□□ -0.64
ACTN1-216ENST00000556083 GPC1P35052 558 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 SOAT1P35610 550 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 SKIV2L2P42285 1042 aaKnown RBP11.03□□□□□ -0.64
ACTN1-216ENST00000556083 MRPS15P82914 257 aaKnown RBP11.03□□□□□ -0.64
ACTN1-216ENST00000556083 TCEA2Q15560 299 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 INSCQ1MX18 579 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 YME1L1Q96TA2 773 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 DIABLOQ9NR28 239 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 VPS28Q9UK41 221 aa11.03□□□□□ -0.64
ACTN1-216ENST00000556083 MYO3AQ8NEV4 1616 aa11.02□□□□□ -0.64
ACTN1-216ENST00000556083 AIM2O14862 343 aa11.02□□□□□ -0.64
ACTN1-216ENST00000556083 CD3EAPO15446 510 aaKnown RBP11.02□□□□□ -0.64
ACTN1-216ENST00000556083 SERPINI2O75830 405 aa11.02□□□□□ -0.64
ACTN1-216ENST00000556083 AIF1P55008 147 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms