RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 CDO1Q16878 200 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 SYPL2Q5VXT5 272 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 TRNP1Q6NT89 227 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 SYT10Q6XYQ8 523 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 LEMD2Q8NC56 503 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 FAM172AQ8WUF8 416 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 WDR24Q96S15 920 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 NAPGQ99747 312 aaPredicted RBP11.52□□□□□ -0.57
TMEM260-208ENST00000555905 CORO1BQ9BR76 489 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 TTYH1Q9H313 450 aaPredicted RBP11.52□□□□□ -0.57
TMEM260-208ENST00000555905 GOLPH3Q9H4A6 298 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 FAM204AQ9H8W3 233 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 NMUR1Q9HB89 426 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 ASAH2Q9NR71 780 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 TMEM51Q9NW97 253 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.52□□□□□ -0.57
TMEM260-208ENST00000555905 HYOU1Q9Y4L1 999 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 LAMA3Q16787 3333 aa11.52□□□□□ -0.57
TMEM260-208ENST00000555905 CCDC195A0A1B0GUA6 201 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 ZNF840PA6NDX5 716 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 MIF4GDA9UHW6 222 aaKnown RBP11.51□□□□□ -0.57
TMEM260-208ENST00000555905 M0QYT0 321 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 F9P00740 461 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 RARGP13631 454 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 PTPN2P17706 415 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 CDC25CP30307 473 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 RDXP35241 583 aaKnown RBP11.51□□□□□ -0.57
TMEM260-208ENST00000555905 PCK1P35558 622 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 PGFP49763 221 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 HYAL1Q12794 435 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 GRIN2CQ14957 1233 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 RPS6KA1Q15418 735 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 HADHQ16836 314 aaKnown RBP11.51□□□□□ -0.57
TMEM260-208ENST00000555905 C15orf59Q2T9L4 293 aaPredicted RBP11.51□□□□□ -0.57
TMEM260-208ENST00000555905 TCEAL5Q5H9L2 206 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 DNTTIP2Q5QJE6 756 aaKnown RBP11.51□□□□□ -0.57
TMEM260-208ENST00000555905 C10orf120Q5SQS8 335 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 HECTD3Q5T447 861 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 MEI1Q5TIA1 1274 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 SNX30Q5VWJ9 437 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 CC2D1AQ6P1N0 951 aaPredicted RBP11.51□□□□□ -0.57
TMEM260-208ENST00000555905 SND1Q7KZF4 910 aaKnown RBP eCLIP11.51□□□□□ -0.57
TMEM260-208ENST00000555905 STRADAQ7RTN6 431 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 NT5DC3Q86UY8 548 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 ZNF276Q8N554 614 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 UBL4BQ8N7F7 174 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 EFHBQ8N7U6 833 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 ZNF592Q92610 1267 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 CENPIQ92674 756 aaPredicted RBP11.51□□□□□ -0.57
TMEM260-208ENST00000555905 NT5C3BQ969T7 300 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 TBCBQ99426 244 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 NPY6RQ99463 290 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 TMEM121BQ9BXQ6 578 aaPredicted RBP11.51□□□□□ -0.57
TMEM260-208ENST00000555905 PRKD2Q9BZL6 878 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 NACA2Q9H009 215 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 SMOC2Q9H3U7 446 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 SFXN1Q9H9B4 322 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 PIDD1Q9HB75 910 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 ZNF334Q9HCZ1 680 aaPredicted RBP11.51□□□□□ -0.57
TMEM260-208ENST00000555905 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.51□□□□□ -0.57
TMEM260-208ENST00000555905 OSER1Q9NX31 292 aa11.51□□□□□ -0.57
TMEM260-208ENST00000555905 SYNJ2BP-COX16A0A087WUM0 186 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 CCDC66A2RUB6 948 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 ENC1O14682 589 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 PSTPIP1O43586 416 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 PRPSAP2O60256 369 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 TLR5O60602 858 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 LRCH4O75427 683 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 TRUB2O95900 331 aaKnown RBP11.5□□□□□ -0.57
TMEM260-208ENST00000555905 KRT7P08729 469 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 MYL4P12829 197 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 IGFBP4P22692 258 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 CTNNA2P26232 953 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 GABRR2P28476 465 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 GTF2F1P35269 517 aaKnown RBP eCLIP11.5□□□□□ -0.57
TMEM260-208ENST00000555905 TUBP50607 506 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 DEUP1Q05D60 604 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 NME3Q13232 169 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 KCNC3Q14003 757 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 SH3PXD2AQ5TCZ1 1133 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 MSANTD2Q6P1R3 559 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 SCYL2Q6P3W7 929 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 TMEM184AQ6ZMB5 413 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 PDZD4Q76G19 769 aaPredicted RBP11.5□□□□□ -0.57
TMEM260-208ENST00000555905 TMC8Q8IU68 726 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 RHOT1Q8IXI2 618 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 CMASQ8NFW8 434 aaPredicted RBP11.5□□□□□ -0.57
TMEM260-208ENST00000555905 VN1R2Q8NFZ6 395 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 KIF18AQ8NI77 898 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 DQX1Q8TE96 717 aaKnown RBP11.5□□□□□ -0.57
TMEM260-208ENST00000555905 MRPS31Q92665 395 aaKnown RBP11.5□□□□□ -0.57
TMEM260-208ENST00000555905 RNF34Q969K3 372 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 PGAP3Q96FM1 320 aaPredicted RBP11.5□□□□□ -0.57
TMEM260-208ENST00000555905 SERPINB11Q96P15 392 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 GAS2L1Q99501 681 aaPredicted RBP11.5□□□□□ -0.57
TMEM260-208ENST00000555905 DDIT4Q9NX09 232 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 COX16Q9P0S2 106 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 DNMT3LQ9UJW3 386 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 TRIOBPQ9H2D6 2365 aa11.5□□□□□ -0.57
TMEM260-208ENST00000555905 OBSL1O75147 1896 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms