RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 PRKAG1P54619 331 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 KRTAP10-3P60369 221 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 MFSD13AQ14CX5 517 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 PTCHD3Q3KNS1 767 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 CERCAMQ5T4B2 595 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 SLC15A4Q8N697 577 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 DNAJC5GQ8N7S2 189 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 LMO3Q8TAP4 145 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 TMEM171Q8WVE6 324 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 OIT3Q8WWZ8 545 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 SCNM1Q9BWG6 230 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 SEZ6LQ9BYH1 1024 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 TRIM36Q9NQ86 728 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 PAPOLBQ9NRJ5 636 aaKnown RBP3.77□□□□□ -1.81
SRP54-207ENST00000555535 LPAR3Q9UBY5 353 aa3.77□□□□□ -1.81
SRP54-207ENST00000555535 A0A1B0GUV1 79 aa3.76□□□□□ -1.81
SRP54-207ENST00000555535 A0A1B0GVY2 172 aa3.76□□□□□ -1.81
SRP54-207ENST00000555535 PRPF4O43172 522 aaKnown RBP eCLIP3.76□□□□□ -1.81
SRP54-207ENST00000555535 CREB1P16220 341 aa3.76□□□□□ -1.81
SRP54-207ENST00000555535 ART1P52961 327 aa3.76□□□□□ -1.81
SRP54-207ENST00000555535 POU3F1Q03052 451 aaPredicted RBP3.76□□□□□ -1.81
SRP54-207ENST00000555535 SLC14A1Q13336 389 aa3.76□□□□□ -1.81
SRP54-207ENST00000555535 CCNIQ14094 377 aa3.76□□□□□ -1.81
SRP54-207ENST00000555535 SLC4A8Q2Y0W8 1093 aa3.76□□□□□ -1.81
SRP54-207ENST00000555535 ATAT1Q5SQI0 421 aa3.76□□□□□ -1.81
SRP54-207ENST00000555535 GAS2L3Q86XJ1 694 aa3.76□□□□□ -1.81
SRP54-207ENST00000555535 GRAMD1CQ8IYS0 662 aa3.76□□□□□ -1.81
SRP54-207ENST00000555535 TRMT61AQ96FX7 289 aaKnown RBP3.76□□□□□ -1.81
SRP54-207ENST00000555535 NT5C1BQ96P26 610 aa3.76□□□□□ -1.81
SRP54-207ENST00000555535 GBA2Q9HCG7 927 aaPredicted RBP3.76□□□□□ -1.81
SRP54-207ENST00000555535 ANAPC4Q9UJX5 808 aa3.76□□□□□ -1.81
SRP54-207ENST00000555535 USP22Q9UPT9 525 aa3.76□□□□□ -1.81
SRP54-207ENST00000555535 DRG1Q9Y295 367 aaKnown RBP3.76□□□□□ -1.81
SRP54-207ENST00000555535 STXBP5LQ9Y2K9 1186 aa3.76□□□□□ -1.81
SRP54-207ENST00000555535 SCN5AQ14524 2016 aa3.76□□□□□ -1.81
SRP54-207ENST00000555535 CADPSQ9ULU8 1353 aa3.76□□□□□ -1.81
SRP54-207ENST00000555535 A0A087WWL8 130 aa3.75□□□□□ -1.81
SRP54-207ENST00000555535 A0A088AWK7 358 aa3.75□□□□□ -1.81
SRP54-207ENST00000555535 MYO1CO00159 1063 aa3.75□□□□□ -1.81
SRP54-207ENST00000555535 THP07101 528 aa3.75□□□□□ -1.81
SRP54-207ENST00000555535 HOXC6P09630 235 aa3.75□□□□□ -1.81
SRP54-207ENST00000555535 NPR1P16066 1061 aa3.75□□□□□ -1.81
SRP54-207ENST00000555535 ARFIP2P53365 341 aa3.75□□□□□ -1.81
SRP54-207ENST00000555535 CTBP1Q13363 440 aa3.75□□□□□ -1.81
SRP54-207ENST00000555535 ZNF267Q14586 743 aaPredicted RBP3.75□□□□□ -1.81
SRP54-207ENST00000555535 PLA1AQ53H76 456 aa3.75□□□□□ -1.81
SRP54-207ENST00000555535 CEP85LQ5SZL2 805 aa3.75□□□□□ -1.81
SRP54-207ENST00000555535 LPAR1Q92633 364 aa3.75□□□□□ -1.81
SRP54-207ENST00000555535 PPP2R3CQ969Q6 453 aa3.75□□□□□ -1.81
SRP54-207ENST00000555535 CTHRC1Q96CG8 243 aa3.75□□□□□ -1.81
SRP54-207ENST00000555535 MAP3K14Q99558 947 aa3.75□□□□□ -1.81
SRP54-207ENST00000555535 CDT1Q9H211 546 aa3.75□□□□□ -1.81
SRP54-207ENST00000555535 SLC12A5Q9H2X9 1139 aa3.75□□□□□ -1.81
SRP54-207ENST00000555535 TCF7L1Q9HCS4 588 aa3.75□□□□□ -1.81
SRP54-207ENST00000555535 ZNF335Q9H4Z2 1342 aaPredicted RBP3.74□□□□□ -1.81
SRP54-207ENST00000555535 TMEM233B4DJY2 109 aa3.74□□□□□ -1.81
SRP54-207ENST00000555535 EPHA3P29320 983 aa3.74□□□□□ -1.81
SRP54-207ENST00000555535 PRKAR1BP31321 381 aa3.74□□□□□ -1.81
SRP54-207ENST00000555535 MTHFSP49914 203 aa3.74□□□□□ -1.81
SRP54-207ENST00000555535 BCAT1P54687 386 aa3.74□□□□□ -1.81
SRP54-207ENST00000555535 ERVFC1-1P60608 527 aa3.74□□□□□ -1.81
SRP54-207ENST00000555535 RAB1AP62820 205 aa3.74□□□□□ -1.81
SRP54-207ENST00000555535 FGL2Q14314 439 aa3.74□□□□□ -1.81
SRP54-207ENST00000555535 KRTAP24-1Q3LI83 254 aa3.74□□□□□ -1.81
SRP54-207ENST00000555535 BRDTQ58F21 947 aaPredicted RBP3.74□□□□□ -1.81
SRP54-207ENST00000555535 C12orf76Q8N812 135 aaPredicted RBP3.74□□□□□ -1.81
SRP54-207ENST00000555535 BPIFB1Q8TDL5 484 aa3.74□□□□□ -1.81
SRP54-207ENST00000555535 RAPGEF4Q8WZA2 1011 aa3.74□□□□□ -1.81
SRP54-207ENST00000555535 TAF15Q92804 592 aaKnown RBP eCLIP3.74□□□□□ -1.81
SRP54-207ENST00000555535 CHMP4CQ96CF2 233 aa3.74□□□□□ -1.81
SRP54-207ENST00000555535 MTFMTQ96DP5 389 aaKnown RBP3.74□□□□□ -1.81
SRP54-207ENST00000555535 TRIM54Q9BYV2 358 aa3.74□□□□□ -1.81
SRP54-207ENST00000555535 PIH1D1Q9NWS0 290 aaKnown RBP3.74□□□□□ -1.81
SRP54-207ENST00000555535 MYO6Q9UM54 1294 aa3.74□□□□□ -1.81
SRP54-207ENST00000555535 NOTCH2Q04721 2471 aa3.73□□□□□ -1.81
SRP54-207ENST00000555535 BTBD18B2RXH4 712 aa3.73□□□□□ -1.81
SRP54-207ENST00000555535 DDNO94850 711 aaPredicted RBP3.73□□□□□ -1.81
SRP54-207ENST00000555535 CCDC6Q16204 474 aa3.73□□□□□ -1.81
SRP54-207ENST00000555535 SPARTQ8N0X7 666 aa3.73□□□□□ -1.81
SRP54-207ENST00000555535 C1GALT1C1Q96EU7 318 aa3.73□□□□□ -1.81
SRP54-207ENST00000555535 MS4A7Q9GZW8 240 aaPredicted RBP3.73□□□□□ -1.81
SRP54-207ENST00000555535 NUAK2Q9H093 628 aa3.73□□□□□ -1.81
SRP54-207ENST00000555535 SMURF2Q9HAU4 748 aa3.73□□□□□ -1.81
SRP54-207ENST00000555535 PCDH12Q9NPG4 1184 aa3.73□□□□□ -1.81
SRP54-207ENST00000555535 ARL8BQ9NVJ2 186 aa3.73□□□□□ -1.81
SRP54-207ENST00000555535 ZSCAN32Q9NX65 697 aa3.73□□□□□ -1.81
SRP54-207ENST00000555535 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.73□□□□□ -1.81
SRP54-207ENST00000555535 GABBR1Q9UBS5 961 aa3.73□□□□□ -1.81
SRP54-207ENST00000555535 IP6K2Q9UHH9 426 aa3.73□□□□□ -1.81
SRP54-207ENST00000555535 AGO2Q9UKV8 859 aaKnown RBP3.73□□□□□ -1.81
SRP54-207ENST00000555535 TRBV5-3A0A0A0MS03 114 aa3.72□□□□□ -1.81
SRP54-207ENST00000555535 BTN3A1O00481 513 aa3.72□□□□□ -1.81
SRP54-207ENST00000555535 SPRY2O43597 315 aa3.72□□□□□ -1.81
SRP54-207ENST00000555535 PF4V1P10720 104 aa3.72□□□□□ -1.81
SRP54-207ENST00000555535 NCLP19338 710 aaKnown RBP3.72□□□□□ -1.81
SRP54-207ENST00000555535 HOXA11P31270 313 aaPredicted RBP3.72□□□□□ -1.81
SRP54-207ENST00000555535 VEGFCP49767 419 aa3.72□□□□□ -1.81
SRP54-207ENST00000555535 POU5F1BQ06416 359 aa3.72□□□□□ -1.81
SRP54-207ENST00000555535 SHBQ15464 509 aa3.72□□□□□ -1.81
SRP54-207ENST00000555535 LMBRD2Q68DH5 695 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms