RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 WDTC1Q8N5D0 677 aa14.34□□□□□ -0.11
SNX6-203ENST00000555416 CD101Q93033 1021 aa14.34□□□□□ -0.11
SNX6-203ENST00000555416 LSM14BQ9BX40 385 aaKnown RBP14.34□□□□□ -0.11
SNX6-203ENST00000555416 PROB1E7EW31 1015 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 K7ESF4 209 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 TRIM24O15164 1050 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 EPHB6O15197 1021 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 RNF40O75150 1001 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 RALAP11233 206 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 ADH5P11766 374 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 ZNF18P17022 549 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 MYL5Q02045 173 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 NR1H3Q13133 447 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 STILQ15468 1287 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 KLHDC7AQ5VTJ3 777 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 ASCL5Q7RTU5 278 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 APTXQ7Z2E3 356 aaKnown RBP14.33□□□□□ -0.12
SNX6-203ENST00000555416 SLC47A2Q86VL8 602 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 SCUBE3Q8IX30 993 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 FAM71AQ8IYT1 594 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 SCML4Q8N228 414 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 SPEM1Q8N4L4 309 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 NELL1Q92832 810 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 NAA15Q9BXJ9 866 aaKnown RBP14.33□□□□□ -0.12
SNX6-203ENST00000555416 MIS12Q9H081 205 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 IRF2BPLQ9H1B7 796 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 CNGB3Q9NQW8 809 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 SPHK2Q9NRA0 654 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 MARCH2Q9P0N8 246 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 TBC1D14Q9P2M4 693 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 SFMBT1Q9UHJ3 866 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 FBXO4Q9UKT5 387 aa14.33□□□□□ -0.12
SNX6-203ENST00000555416 FANCMQ8IYD8 2048 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 SLC12A8A0AV02 714 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 FAM170AA1A519 330 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 K7EQS6 105 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 MSI1O43347 362 aaKnown RBP14.32□□□□□ -0.12
SNX6-203ENST00000555416 FYNP06241 537 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 ATP1A3P13637 1013 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 CXCL12P48061 93 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 DRAP1Q14919 205 aaPredicted RBP14.32□□□□□ -0.12
SNX6-203ENST00000555416 ANO6Q4KMQ2 910 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 BTBD8Q5XKL5 378 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 TPGS1Q6ZTW0 290 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 RSRC2Q7L4I2 434 aaKnown RBP14.32□□□□□ -0.12
SNX6-203ENST00000555416 PASD1Q8IV76 773 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 ETFBKMTQ8IXQ9 262 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 ARHGAP18Q8N392 663 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 PHTF2Q8N3S3 785 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 AOPEPQ8N6M6 819 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 NAT16Q8N8M0 369 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 PIWIL1Q96J94 861 aaKnown RBP14.32□□□□□ -0.12
SNX6-203ENST00000555416 HSFY1Q96LI6 401 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 FUCA2Q9BTY2 467 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 SLC4A5Q9BY07 1137 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 GANQ9H2C0 597 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 PLCB1Q9NQ66 1216 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 WDR87Q6ZQQ6 2873 aa14.32□□□□□ -0.12
SNX6-203ENST00000555416 KIAA1549LQ6ZVL6 1849 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 E5RJQ4 531 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 HOXC11O43248 304 aaPredicted RBP14.31□□□□□ -0.12
SNX6-203ENST00000555416 PAPSS1O43252 624 aaPredicted RBP14.31□□□□□ -0.12
SNX6-203ENST00000555416 ADH1CP00326 375 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 UCHL3P15374 230 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 DRD1P21728 446 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 CORO1AP31146 461 aaKnown RBP14.31□□□□□ -0.12
SNX6-203ENST00000555416 CCR3P51677 355 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 COPB1P53618 953 aaKnown RBP14.31□□□□□ -0.12
SNX6-203ENST00000555416 SEC13P55735 322 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 AMPD2Q01433 879 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 KDSRQ06136 332 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 RAPGEF1Q13905 1077 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 ZNF528Q3MIS6 628 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 EMC10Q5UCC4 262 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 FMNL3Q8IVF7 1028 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 SYNPOQ8N3V7 929 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 RPLP0P6Q8NHW5 317 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 BHMTQ93088 406 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 OTUB2Q96DC9 234 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 FAM81BQ96LP2 452 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 IER2Q9BTL4 223 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 ST7Q9NRC1 585 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 LIMA1Q9UHB6 759 aaKnown RBP14.31□□□□□ -0.12
SNX6-203ENST00000555416 AGO1Q9UL18 857 aaKnown RBP14.31□□□□□ -0.12
SNX6-203ENST00000555416 SIK3Q9Y2K2 1263 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 GPR179Q6PRD1 2367 aa14.31□□□□□ -0.12
SNX6-203ENST00000555416 PRR23AA6NEV1 266 aa14.3□□□□□ -0.12
SNX6-203ENST00000555416 MED7O43513 233 aa14.3□□□□□ -0.12
SNX6-203ENST00000555416 TULP3O75386 442 aa14.3□□□□□ -0.12
SNX6-203ENST00000555416 LTFP02788 710 aa14.3□□□□□ -0.12
SNX6-203ENST00000555416 PDCLQ13371 301 aa14.3□□□□□ -0.12
SNX6-203ENST00000555416 TAF5Q15542 800 aa14.3□□□□□ -0.12
SNX6-203ENST00000555416 TRIP4Q15650 581 aaPredicted RBP14.3□□□□□ -0.12
SNX6-203ENST00000555416 MEA1Q16626 185 aa14.3□□□□□ -0.12
SNX6-203ENST00000555416 ANO4Q32M45 955 aa14.3□□□□□ -0.12
SNX6-203ENST00000555416 HEATR6Q6AI08 1181 aaKnown RBP14.3□□□□□ -0.12
SNX6-203ENST00000555416 TADA2BQ86TJ2 420 aa14.3□□□□□ -0.12
SNX6-203ENST00000555416 TMEM110Q86TL2 294 aa14.3□□□□□ -0.12
SNX6-203ENST00000555416 DENND1CQ8IV53 801 aa14.3□□□□□ -0.12
SNX6-203ENST00000555416 DHX40Q8IX18 779 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms