RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 TRIM68Q6AZZ1 485 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 TAPT1Q6NXT6 567 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 HERPUD2Q9BSE4 406 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 FAM167BQ9BTA0 163 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 ST6GALNAC4Q9H4F1 302 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 RPS6KL1Q9Y6S9 549 aa12.67□□□□□ -0.38
ARHGEF40-206ENST00000555232 UBA6A0AVT1 1052 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 TBKBP1A7MCY6 615 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 CRCPO75575 148 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 TTC4O95801 387 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 BAG2O95816 211 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 TFE3P19532 575 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 CNGA2Q16280 664 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 CCDC62Q6P9F0 684 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 SDCCAG8Q86SQ7 713 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 CROCCP2Q86T23 111 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 NDUFAF2Q8N183 169 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 RMDN1Q96DB5 314 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 SCLYQ96I15 445 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 RPRD1AQ96P16 312 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 BFARQ9NZS9 450 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 PGAP2Q9UHJ9 254 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 NRAPQ86VF7 1730 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 CDK5RAP2Q96SN8 1893 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 A8MX80 341 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 NEMP1O14524 444 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 PPFIA2O75334 1257 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 UNGP13051 313 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 RPL17P18621 184 aaKnown RBP12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 ASPAP45381 313 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 PRPSAP1Q14558 356 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 THEMIS2Q5TEJ8 643 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 C9orf57Q5W0N0 161 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 PPP1R2P3Q6NXS1 205 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 SHCBP1Q8NEM2 672 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 ZNF483Q8TF39 744 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 EPAS1Q99814 870 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 SH3GL3Q99963 347 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 TLK1Q9UKI8 766 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 TIAM2Q8IVF5 1701 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 LTBP3Q9NS15 1303 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 C9IYK1 514 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 PRRG1O14668 218 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 MT-CO1P00395 513 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 PIRTP0C851 137 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 RPL22P35268 128 aaKnown RBP12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 CSE1LP55060 971 aaKnown RBP12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 GJA9P57773 515 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 SLC6A3Q01959 620 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 MAP3K10Q02779 954 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 POU6F1Q14863 301 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 CEP128Q6ZU80 1094 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 CHSY1Q86X52 802 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 MYCBPAPQ8TBZ2 947 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 CCHCR1Q8TD31 782 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 EMID1Q96A84 441 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 ALKBH8Q96BT7 664 aaKnown RBP12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 EPN3Q9H201 632 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 SP110Q9HB58 689 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 FLRT1Q9NZU1 646 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 VANGL2Q9ULK5 521 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 L3MBTL1Q9Y468 752 aa12.66□□□□□ -0.38
ARHGEF40-206ENST00000555232 NCANO14594 1321 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 SIGLEC16A6NMB1 481 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 CFLARO15519 480 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 CCND3P30281 292 aaPredicted RBP12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 HSPA9P38646 679 aaKnown RBP12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 EFHC1Q5JVL4 640 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 DUPD1Q68J44 220 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 ZCCHC23Q6ZST2 131 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 FUKQ8N0W3 1084 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 KCNV2Q8TDN2 545 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 SREK1Q8WXA9 508 aaKnown RBP12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 STAMBPL1Q96FJ0 436 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 C16orf70Q9BSU1 422 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 TKTL2Q9H0I9 626 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 SLC12A6Q9UHW9 1150 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 COL22A1Q8NFW1 1626 aaPredicted RBP12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 IQANK1A0A1B0GTG1 560 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 B4GALT4O60513 344 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 CILPO75339 1184 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 FAM155BO75949 473 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 ERMARDQ5T6L9 678 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 ANKRD22Q5VYY1 191 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 CYP4F11Q9HBI6 524 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 SLC38A7Q9NVC3 462 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 MPP6Q9NZW5 540 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 COQ4Q9Y3A0 265 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 PCDHB7Q9Y5E2 793 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 NHSQ6T4R5 1651 aa12.65□□□□□ -0.38
ARHGEF40-206ENST00000555232 LSM8O95777 96 aaKnown RBP12.65□□□□□ -0.39
ARHGEF40-206ENST00000555232 PMLP29590 882 aa12.65□□□□□ -0.39
ARHGEF40-206ENST00000555232 ALDH7A1P49419 539 aaKnown RBP12.65□□□□□ -0.39
ARHGEF40-206ENST00000555232 PITX1P78337 314 aaPredicted RBP12.65□□□□□ -0.39
ARHGEF40-206ENST00000555232 MRPS6P82932 125 aaKnown RBP12.65□□□□□ -0.39
ARHGEF40-206ENST00000555232 OLIG2Q13516 323 aa12.65□□□□□ -0.39
ARHGEF40-206ENST00000555232 CAPRIN2Q6IMN6 1127 aaKnown RBP12.65□□□□□ -0.39
ARHGEF40-206ENST00000555232 ZNF410Q86VK4 478 aa12.65□□□□□ -0.39
ARHGEF40-206ENST00000555232 PPIL6Q8IXY8 311 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms