RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 HELZP42694 1942 aaKnown RBP12.95□□□□□ -0.34
SYNE2-214ENST00000554928 KMT2EQ8IZD2 1858 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 ZNF318Q5VUA4 2279 aa12.95□□□□□ -0.34
SYNE2-214ENST00000554928 FAM170BA6NMN3 283 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 STC2O76061 302 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 SERPINC1P01008 464 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 CYP17A1P05093 508 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 RALAP11233 206 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 COL9A1P20849 921 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 GJA4P35212 333 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 PSEN1P49768 467 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 CLCN5P51795 746 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 PITX1P78337 314 aaPredicted RBP12.94□□□□□ -0.34
SYNE2-214ENST00000554928 FMO1Q01740 532 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 MESP2Q0VG99 397 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 PON2Q15165 354 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 PDGFRLQ15198 375 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 MEA1Q16626 185 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 BTBD8Q5XKL5 378 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 KLHDC10Q6PID8 442 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 RHBDF2Q6PJF5 856 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 C12orf40Q86WS4 652 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 ADGRG2Q8IZP9 1017 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 ZNF276Q8N554 614 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 PRSS33Q8NF86 280 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 STK32AQ8WU08 396 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 BAP1Q92560 729 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 EZH1Q92800 747 aaPredicted RBP12.94□□□□□ -0.34
SYNE2-214ENST00000554928 PCDHB18PQ96TA0 734 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 LHX5Q9H2C1 402 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 MARCH2Q9P0N8 246 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 NAALADL1Q9UQQ1 740 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 F5P12259 2224 aa12.94□□□□□ -0.34
SYNE2-214ENST00000554928 WDFY4Q6ZS81 3184 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 SLC12A8A0AV02 714 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 E2F8A0AVK6 867 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 LTFP02788 710 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 HOXC13P31276 330 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 KRT9P35527 623 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 PBX1P40424 430 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 STAT1P42224 750 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 ARID5AQ03989 594 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 DHCR24Q15392 516 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 SYPL2Q5VXT5 272 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 ZNF852Q6ZMS4 543 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 Q6ZNB5 142 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 FAM183BPQ6ZVS7 135 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 RSRC2Q7L4I2 434 aaKnown RBP12.93□□□□□ -0.34
SYNE2-214ENST00000554928 FMNL3Q8IVF7 1028 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 SFTPA1Q8IWL2 248 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 ARHGAP18Q8N392 663 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 IRGQQ8WZA9 623 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 SHDQ96IW2 340 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 PPP1R13BQ96KQ4 1090 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 SPAG5Q96R06 1193 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 TTYH3Q9C0H2 523 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 C8orf33Q9H7E9 229 aaPredicted RBP12.93□□□□□ -0.34
SYNE2-214ENST00000554928 IFNKQ9P0W0 207 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 SH3BP1Q9Y3L3 701 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 SIT1Q9Y3P8 196 aa12.93□□□□□ -0.34
SYNE2-214ENST00000554928 TRIM24O15164 1050 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 GRAP2O75791 330 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 FBXO21O94952 628 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 CHRNB1P11230 501 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 CDH5P33151 784 aaPredicted RBP12.92□□□□□ -0.34
SYNE2-214ENST00000554928 OPRD1P41143 372 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 ACADSBP45954 432 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 SLC6A11P48066 632 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 BPIFB4P59827 614 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 NOMO3P69849 1222 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 GAS6Q14393 721 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 FILIP1LQ4L180 1135 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 LY6G5CQ5SRR4 150 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 NAA35Q5VZE5 725 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 FSTL4Q6MZW2 842 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 MSANTD2Q6P1R3 559 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 Q6ZS52 159 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 HTR3DQ70Z44 454 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 PHLDB2Q86SQ0 1253 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 RALGPS2Q86X27 583 aaPredicted RBP12.92□□□□□ -0.34
SYNE2-214ENST00000554928 DDX42Q86XP3 938 aaKnown RBP eCLIP12.92□□□□□ -0.34
SYNE2-214ENST00000554928 TMEM25Q86YD3 366 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 CPA6Q8N4T0 437 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 ADAM32Q8TC27 787 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 DQX1Q8TE96 717 aaKnown RBP12.92□□□□□ -0.34
SYNE2-214ENST00000554928 CPA5Q8WXQ8 436 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 ATP2A3Q93084 1043 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 FAM149B1Q96BN6 582 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 POLR3BQ9NW08 1133 aaPredicted RBP12.92□□□□□ -0.34
SYNE2-214ENST00000554928 C2orf42Q9NWW7 574 aa12.92□□□□□ -0.34
SYNE2-214ENST00000554928 A0A1W2PQC6 194 aa12.91□□□□□ -0.34
SYNE2-214ENST00000554928 LRRC53A6NM62 1247 aa12.91□□□□□ -0.34
SYNE2-214ENST00000554928 GOLGA6L19H0YKK7 550 aa12.91□□□□□ -0.34
SYNE2-214ENST00000554928 MAN2B1O00754 1011 aa12.91□□□□□ -0.34
SYNE2-214ENST00000554928 AP5Z1O43299 807 aa12.91□□□□□ -0.34
SYNE2-214ENST00000554928 NFATC1O95644 943 aa12.91□□□□□ -0.34
SYNE2-214ENST00000554928 CAVIN2O95810 425 aa12.91□□□□□ -0.34
SYNE2-214ENST00000554928 EGFP01133 1207 aa12.91□□□□□ -0.34
SYNE2-214ENST00000554928 CORO1AP31146 461 aaKnown RBP12.91□□□□□ -0.34
SYNE2-214ENST00000554928 GALK1P51570 392 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms