RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 M0QZQ0 153 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 CLDN3O15551 220 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 ARIH2O95376 493 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 GDF11O95390 407 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 GH1P01241 217 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 KRT18P05783 430 aaKnown RBP3.59□□□□□ -1.84
SEC23A-207ENST00000554615 BPGMP07738 259 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 INHBBP09529 407 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 CYP2C9P11712 490 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 CST5P28325 142 aaPredicted RBP3.59□□□□□ -1.84
SEC23A-207ENST00000554615 ALDH3B2P48448 385 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 HDAC4P56524 1084 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 MRPS25P82663 173 aaKnown RBP3.59□□□□□ -1.84
SEC23A-207ENST00000554615 TXNL4AP83876 142 aaKnown RBP3.59□□□□□ -1.84
SEC23A-207ENST00000554615 PPIDQ08752 370 aaKnown RBP3.59□□□□□ -1.84
SEC23A-207ENST00000554615 SLC10A6Q3KNW5 377 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 TEDDM1Q5T9Z0 273 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 CCDC181Q5TID7 509 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 IZUMO3Q5VZ72 239 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 FBXW10Q5XX13 1052 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 MAP1SQ66K74 1059 aaPredicted RBP3.59□□□□□ -1.84
SEC23A-207ENST00000554615 DENND1BQ6P3S1 775 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 UGT2A3Q6UWM9 527 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 CYHR1Q6ZMK1 362 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 USP51Q70EK9 711 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 CENPUQ71F23 418 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 KSR1Q8IVT5 923 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 TPH2Q8IWU9 490 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 KIAA1958Q8N8K9 716 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 TSPEARQ8WU66 669 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 FBXW7Q969H0 707 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 HDAC11Q96DB2 347 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 L3HYPDHQ96EM0 354 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 BICD1Q96G01 975 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 NGLY1Q96IV0 654 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 HSFY1Q96LI6 401 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 HNRNPABQ99729 332 aaKnown RBP3.59□□□□□ -1.84
SEC23A-207ENST00000554615 ARID3AQ99856 593 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 CNPY3Q9BT09 278 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 OSBPL2Q9H1P3 480 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 FAM96AQ9H5X1 160 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 PCDH18Q9HCL0 1135 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 KMT5AQ9NQR1 393 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 C8orf4Q9NR00 106 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 LATS2Q9NRM7 1088 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 TOPORSQ9NS56 1045 aaPredicted RBP3.59□□□□□ -1.84
SEC23A-207ENST00000554615 UTP6Q9NYH9 597 aaKnown RBP3.59□□□□□ -1.84
SEC23A-207ENST00000554615 RRN3Q9NYV6 651 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 TMOD4Q9NZQ9 345 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 RIMS3Q9UJD0 308 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 BARX2Q9UMQ3 279 aaPredicted RBP3.59□□□□□ -1.84
SEC23A-207ENST00000554615 IVNS1ABPQ9Y6Y0 642 aa3.59□□□□□ -1.84
SEC23A-207ENST00000554615 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.59□□□□□ -1.84
SEC23A-207ENST00000554615 SMIM35A0A1B0GVV1 85 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 TCRBV7S3A2A0A539 114 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 SLC16A4O15374 487 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 MED7O43513 233 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 TADA2AO75478 443 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 USP1O94782 785 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 RPLP2P05387 115 aaKnown RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 PABPC4LP0CB38 370 aaKnown RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 TAL1P17542 331 aaPredicted RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 GCLMP48507 274 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 CSE1LP55060 971 aaKnown RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 KCNJ2P63252 427 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 LAMTOR4Q0VGL1 99 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 CETN1Q12798 172 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 SLC10A2Q12908 348 aaPredicted RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 GRIK2Q13002 908 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 DOK7Q18PE1 504 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 TRIM71Q2Q1W2 868 aaKnown RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 AP1ARQ63HQ0 302 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 DENND5AQ6IQ26 1287 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 METTL2BQ6P1Q9 378 aaKnown RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 PTRH1Q86Y79 214 aaKnown RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 ARHGEF2Q92974 986 aaKnown RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 CCDC102AQ96A19 550 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 ZNF653Q96CK0 615 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 RAB3IPQ96QF0 476 aaPredicted RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 SPAG5Q96R06 1193 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 IL12RB2Q99665 862 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 MRPL4Q9BYD3 311 aaKnown RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 DEF6Q9H4E7 631 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 DCLRE1BQ9H816 532 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 DBNDD1Q9H9R9 158 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 ZNF302Q9NR11 478 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 METTL5Q9NRN9 209 aaKnown RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 CISHQ9NSE2 258 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 MRGBPQ9NV56 204 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 PRMT7Q9NVM4 692 aaPredicted RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 HOXC10Q9NYD6 342 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 HSFX1Q9UBD0 423 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 PPARGC1AQ9UBK2 798 aaKnown RBP3.58□□□□□ -1.84
SEC23A-207ENST00000554615 PHTF1Q9UMS5 762 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 ANKRD6Q9Y2G4 727 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 MROH6A6NGR9 719 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 A6NJR5 290 aa3.58□□□□□ -1.84
SEC23A-207ENST00000554615 NPHS1O60500 1241 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms