RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 TPGS1Q6ZTW0 290 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 HTR3DQ70Z44 454 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 ASCL5Q7RTU5 278 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 RPLP0P6Q8NHW5 317 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 KCTD13Q8WZ19 329 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 EDEM1Q92611 657 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 GOLGA1Q92805 767 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 PNKPQ96T60 521 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 ZSWIM1Q9BR11 485 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 MIS12Q9H081 205 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 SEMA4AQ9H3S1 761 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 SPHK2Q9NRA0 654 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 ANO10Q9NW15 660 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 TAB2Q9NYJ8 693 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 SLC8A2Q9UPR5 921 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 PCDHGA2Q9Y5H1 932 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 MYO15AQ9UKN7 3530 aa11.18□□□□□ -0.62
SHMT2-213ENST00000554600 PI4KAP42356 2102 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 DMDP11532 3685 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-213ENST00000554600 CHURC1-FNTBB4DL54 471 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 NEDD8-MDP1E9PL57 170 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 STC2O76061 302 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 LMNAP02545 664 aaKnown RBP11.17□□□□□ -0.62
SHMT2-213ENST00000554600 EEF1GP26641 437 aaKnown RBP11.17□□□□□ -0.62
SHMT2-213ENST00000554600 FNTBP49356 437 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 RAPGEF1Q13905 1077 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 PKDCCQ504Y2 493 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 C2orf27AQ580R0 203 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 TCP11X2Q5H9J9 407 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 BSPRYQ5W0U4 402 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 PM20D1Q6GTS8 502 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 DENND1BQ6P3S1 775 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 MAMSTRQ6ZN01 415 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 C11orf57Q6ZUT1 292 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-213ENST00000554600 C12orf40Q86WS4 652 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 TMEM25Q86YD3 366 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 CCDC26Q8TAB7 109 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 SLC35F5Q8WV83 523 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 BHMTQ93088 406 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 BBS2Q9BXC9 721 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 FAM126AQ9BYI3 521 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-213ENST00000554600 DCLK3Q9C098 648 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 VPS16Q9H269 839 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 ACP6Q9NPH0 428 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 CNGB3Q9NQW8 809 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 ARHGEF4Q9NR80 690 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 ABCC13Q9NSE7 274 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 OLA1Q9NTK5 396 aaKnown RBP11.17□□□□□ -0.62
SHMT2-213ENST00000554600 C2orf42Q9NWW7 574 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 DNAJC12Q9UKB3 198 aa11.17□□□□□ -0.62
SHMT2-213ENST00000554600 ZNF292O60281 2723 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 YJEFN3A6XGL0 299 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 E7ENQ6 273 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 FBXO21O94952 628 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 KAT7O95251 611 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 CORO1AP31146 461 aaKnown RBP11.16□□□□□ -0.62
SHMT2-213ENST00000554600 PXNP49023 591 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-213ENST00000554600 DAOAP59103 153 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 PTK2Q05397 1052 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 GAB4Q2WGN9 574 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 MIIPQ5JXC2 388 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 PRR23BQ6ZRT6 265 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 RBM43Q6ZSC3 357 aaKnown RBP11.16□□□□□ -0.62
SHMT2-213ENST00000554600 DENND1CQ8IV53 801 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 FMNL3Q8IVF7 1028 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 ZNF276Q8N554 614 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 CCDC33Q8N5R6 958 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 ANKRD20A12PQ8NF67 263 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 ENOX1Q8TC92 643 aaKnown RBP11.16□□□□□ -0.62
SHMT2-213ENST00000554600 ZNF606Q8WXB4 792 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 ACDQ96AP0 544 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 FAM149B1Q96BN6 582 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 HSFY1Q96LI6 401 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 XPO6Q96QU8 1125 aaKnown RBP11.16□□□□□ -0.62
SHMT2-213ENST00000554600 LSM14BQ9BX40 385 aaKnown RBP11.16□□□□□ -0.62
SHMT2-213ENST00000554600 PDCL3Q9H2J4 239 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 DNAJC17Q9NVM6 304 aaKnown RBP11.16□□□□□ -0.62
SHMT2-213ENST00000554600 POLR3BQ9NW08 1133 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-213ENST00000554600 WDR35Q9P2L0 1181 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 DEC1Q9P2X7 70 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 SFMBT1Q9UHJ3 866 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 RAB23Q9ULC3 237 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 CNTN6Q9UQ52 1028 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 ZNF510Q9Y2H8 683 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 VPS13AQ96RL7 3174 aa11.16□□□□□ -0.62
SHMT2-213ENST00000554600 CEP250Q9BV73 2442 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 TBC1D3BA6NDS4 549 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 BECN2A8MW95 431 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 K7ESF4 209 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 TULP3O75386 442 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 LTFP02788 710 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 PNMA6AP0CW24 399 aaPredicted RBP11.15□□□□□ -0.62
SHMT2-213ENST00000554600 TDGF1P13385 188 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 TYRP14679 529 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 CDK11BP21127 795 aaKnown RBP11.15□□□□□ -0.62
SHMT2-213ENST00000554600 HOXC13P31276 330 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 TIE1P35590 1138 aa11.15□□□□□ -0.62
SHMT2-213ENST00000554600 EIF2DP41214 584 aaKnown RBP11.15□□□□□ -0.62
SHMT2-213ENST00000554600 GRIA2P42262 883 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms