RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 ATP6V1B1P15313 513 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 AMD1P17707 334 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 NT5C2P49902 561 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 NAB1Q13506 487 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 ITPK1Q13572 414 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 NR6A1Q15406 480 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 NAB2Q15742 525 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 BRINP3Q76B58 766 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 C4orf33Q8N1A6 199 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 MMGT1Q8N4V1 131 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 LPCAT1Q8NF37 534 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 SAC3D1A6NKF1 404 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 CSN2P05814 226 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 PLA2G4BP0C869 781 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 NDUFA8P51970 172 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.4□□□□□ -1.86
SYNE2-212ENST00000554584 BNIP3Q12983 259 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 TNFAIP1Q13829 316 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 CNGA3Q16281 694 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 CA9Q16790 459 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 CERCAMQ5T4B2 595 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 OTOAQ7RTW8 1153 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 CALML6Q8TD86 181 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 PHF20Q9BVI0 1012 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 IKZF4Q9H2S9 585 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 C20orf96Q9NUD7 363 aaPredicted RBP3.4□□□□□ -1.86
SYNE2-212ENST00000554584 DUSP12Q9UNI6 340 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 MTF2Q9Y483 593 aaPredicted RBP3.4□□□□□ -1.86
SYNE2-212ENST00000554584 TEX14Q8IWB6 1497 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 CYP26A1O43174 497 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 FOSL1P15407 271 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 GNAT2P19087 354 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 PPATQ06203 517 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 C2orf76Q3KRA6 126 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 FOXRED2Q8IWF2 684 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 ADGRG2Q8IZP9 1017 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 CADM2Q8N3J6 435 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 APPBP2Q92624 585 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 MS4A14Q96JA4 679 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF226Q9NYT6 803 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 POLR1AO95602 1720 aaPredicted RBP3.4□□□□□ -1.86
SYNE2-212ENST00000554584 CKMP06732 381 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 LRRC70Q7Z2Q7 622 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF438Q7Z4V0 828 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 TMEM151BQ8IW70 566 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.4□□□□□ -1.86
SYNE2-212ENST00000554584 KDM4CQ9H3R0 1056 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 USP29Q9HBJ7 922 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 ATP8A2Q9NTI2 1148 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 ZNF70Q9UC06 446 aaPredicted RBP3.4□□□□□ -1.86
SYNE2-212ENST00000554584 ATXN7L1Q9ULK2 861 aaPredicted RBP3.4□□□□□ -1.86
SYNE2-212ENST00000554584 NFU1Q9UMS0 254 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 INSRP06213 1382 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 ATG7O95352 703 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 EIF1AXP47813 144 aaKnown RBP3.4□□□□□ -1.86
SYNE2-212ENST00000554584 CRADDP78560 199 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 APOA5Q6Q788 366 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 DGLUCYQ7Z3D6 616 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 C12orf76Q8N812 135 aaPredicted RBP3.4□□□□□ -1.86
SYNE2-212ENST00000554584 PPP1R14BQ96C90 147 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 TRIM15Q9C019 465 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 UPF3AQ9H1J1 476 aaKnown RBP3.4□□□□□ -1.86
SYNE2-212ENST00000554584 CARD9Q9H257 536 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 ECT2Q9H8V3 914 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 MAN1B1Q9UKM7 699 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 F10P00742 488 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 HSPA8P11142 646 aaKnown RBP3.4□□□□□ -1.86
SYNE2-212ENST00000554584 RALBP11234 206 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 ATP6V1B2P21281 511 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 ZCCHC8Q6NZY4 707 aaKnown RBP3.4□□□□□ -1.86
SYNE2-212ENST00000554584 KIAA0408Q6ZU52 694 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 FANCBQ8NB91 859 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 PLAAQ9Y263 795 aa3.4□□□□□ -1.86
SYNE2-212ENST00000554584 ZMYM3Q14202 1370 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 SGCEO43556 437 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 CCDC22O60826 627 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 NR2F2P24468 414 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 ASMTP46597 345 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 EIF4A1P60842 406 aaKnown RBP3.4□□□□□ -1.87
SYNE2-212ENST00000554584 VSNL1P62760 191 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 SCRN1Q12765 414 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 PREPLQ4J6C6 727 aaPredicted RBP3.4□□□□□ -1.87
SYNE2-212ENST00000554584 IRGCQ6NXR0 463 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 LINC00471Q8N535 108 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 LRRN4CLQ8ND94 238 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 CDCA5Q96FF9 252 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 CCDC120Q96HB5 630 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 KIF1BO60333 1816 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 DAB2IPQ5VWQ8 1189 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 ACAD11Q709F0 780 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 KIF2BQ8N4N8 673 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 ATPAF2Q8N5M1 289 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 SERPINI1Q99574 410 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 ZMYM4Q5VZL5 1548 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 FCER1AP12319 257 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 SPOCD1Q6ZMY3 1216 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 ARMCX2Q7L311 632 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 BBS7Q8IWZ6 715 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 SLFN12Q8IYM2 578 aa3.4□□□□□ -1.87
SYNE2-212ENST00000554584 CORO1BQ9BR76 489 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms