RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 NUDT5Q9UKK9 219 aa9.16□□□□□ -0.94
ACTN1-213ENST00000554508 MMP17Q9ULZ9 603 aa9.16□□□□□ -0.94
ACTN1-213ENST00000554508 WDR87Q6ZQQ6 2873 aa9.16□□□□□ -0.94
ACTN1-213ENST00000554508 CEP250Q9BV73 2442 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 CEP192Q8TEP8 1941 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 TBC1D3BA6NDS4 549 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 RNF225M0QZC1 329 aaPredicted RBP9.15□□□□□ -0.94
ACTN1-213ENST00000554508 MDM4O15151 490 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 AXIN1O15169 862 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 FOXD2O60548 495 aaPredicted RBP9.15□□□□□ -0.94
ACTN1-213ENST00000554508 TULP3O75386 442 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 RPP40O75818 363 aaKnown RBP9.15□□□□□ -0.94
ACTN1-213ENST00000554508 STC2O76061 302 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 SDHBP21912 280 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 CHKAP35790 457 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 ID4P47928 161 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 DGKEP52429 567 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 SEC13P55735 322 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 EFEMP1Q12805 493 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 NFKBIBQ15653 356 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 SKOR2Q2VWA4 1001 aaPredicted RBP9.15□□□□□ -0.94
ACTN1-213ENST00000554508 PKDCCQ504Y2 493 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 C2orf27AQ580R0 203 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 EOGTQ5NDL2 527 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 CCDC183Q5T5S1 534 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 CAVIN1Q6NZI2 390 aaKnown RBP9.15□□□□□ -0.94
ACTN1-213ENST00000554508 Q6ZNB5 142 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 RSRC2Q7L4I2 434 aaKnown RBP9.15□□□□□ -0.94
ACTN1-213ENST00000554508 ENOSF1Q7L5Y1 443 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.15□□□□□ -0.94
ACTN1-213ENST00000554508 C12orf40Q86WS4 652 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 SIX6OS1Q8N1H7 587 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 PHTF2Q8N3S3 785 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 TSTD1Q8NFU3 115 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 UBA3Q8TBC4 463 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 SLC35F5Q8WV83 523 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 CNOT6LQ96LI5 555 aaKnown RBP9.15□□□□□ -0.94
ACTN1-213ENST00000554508 ULBP1Q9BZM6 244 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 CNGB3Q9NQW8 809 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 ABCC13Q9NSE7 274 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 RASAL2Q9UJF2 1139 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 STRIP2Q9ULQ0 834 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 STARD13Q9Y3M8 1113 aa9.15□□□□□ -0.94
ACTN1-213ENST00000554508 PLXND1Q9Y4D7 1925 aa9.15□□□□□ -0.95
ACTN1-213ENST00000554508 PRR5-ARHGAP8B1AHC4 643 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 NEDD8-MDP1E9PL57 170 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 TULP2O00295 520 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 CACNG3O60359 315 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 ALDH1A2O94788 518 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 PRKCSHP14314 528 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-213ENST00000554508 TYRP14679 529 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 HOXC13P31276 330 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 KIR2DL1P43626 348 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-213ENST00000554508 PXNP49023 591 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-213ENST00000554508 ZNF132P52740 706 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 ARHGAP8P85298 464 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 LMNB2Q03252 620 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 KDSRQ06136 332 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 ADIGQ0VDE8 80 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 SRSF5Q13243 272 aaKnown RBP9.14□□□□□ -0.95
ACTN1-213ENST00000554508 CRY1Q16526 586 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 LPAL2Q16609 132 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 TPD52L1Q16890 204 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-213ENST00000554508 KLHL40Q2TBA0 621 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 CT47A1Q5JQC4 288 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-213ENST00000554508 GRAMD4Q6IC98 578 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 SASS6Q6UVJ0 657 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 TPGS1Q6ZTW0 290 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 RRAGAQ7L523 313 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 TRMT11Q7Z4G4 463 aaKnown RBP9.14□□□□□ -0.95
ACTN1-213ENST00000554508 C11orf74Q86VG3 221 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 MIB1Q86YT6 1006 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 CREBRFQ8IUR6 639 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 ARHGEF19Q8IW93 802 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 FAM114A1Q8IWE2 563 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 FAM160A2Q8N612 972 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-213ENST00000554508 NAT16Q8N8M0 369 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 TERB1Q8NA31 727 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 IL17RCQ8NAC3 791 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 RBBP8NLQ8NC74 664 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-213ENST00000554508 RNF139Q8WU17 664 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 IRGQQ8WZA9 623 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 TFAP2BQ92481 460 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 KAT5Q92993 513 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 PLD4Q96BZ4 506 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 ZC3H10Q96K80 434 aaKnown RBP9.14□□□□□ -0.95
ACTN1-213ENST00000554508 HSFY1Q96LI6 401 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 KREMEN1Q96MU8 473 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 HHIPQ96QV1 700 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 BBS2Q9BXC9 721 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 INTS2Q9H0H0 1204 aaKnown RBP9.14□□□□□ -0.95
ACTN1-213ENST00000554508 POLMQ9NP87 494 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-213ENST00000554508 UBE2TQ9NPD8 197 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-213ENST00000554508 DNAJC17Q9NVM6 304 aaKnown RBP9.14□□□□□ -0.95
ACTN1-213ENST00000554508 POLR3BQ9NW08 1133 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-213ENST00000554508 MARCH2Q9P0N8 246 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 TMEM63CQ9P1W3 806 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 DACH1Q9UI36 760 aa9.14□□□□□ -0.95
ACTN1-213ENST00000554508 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.14□□□□□ -0.95
ACTN1-213ENST00000554508 CNTN6Q9UQ52 1028 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms