RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 SYPL2Q5VXT5 272 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 KLHDC10Q6PID8 442 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 SND1Q7KZF4 910 aaKnown RBP eCLIP7.98□□□□□ -1.13
TDP1-209ENST00000554180 SPRED2Q7Z698 418 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 SCD5Q86SK9 330 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 TADA2BQ86TJ2 420 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 CPNE8Q86YQ8 564 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 RCOR2Q8IZ40 523 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 KREMEN2Q8NCW0 462 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 MICAL1Q8TDZ2 1067 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 DQX1Q8TE96 717 aaKnown RBP7.98□□□□□ -1.13
TDP1-209ENST00000554180 COG1Q8WTW3 980 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 RNF139Q8WU17 664 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 NDRG1Q92597 394 aaKnown RBP7.98□□□□□ -1.13
TDP1-209ENST00000554180 NTAN1Q96AB6 310 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 SERPINB11Q96P15 392 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 PSMB7Q99436 277 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 NKX2-4Q9H2Z4 354 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 PRO3102Q9H379 93 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.98□□□□□ -1.13
TDP1-209ENST00000554180 GMIPQ9P107 970 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 NAALADL1Q9UQQ1 740 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 PLXNA3P51805 1871 aa7.98□□□□□ -1.13
TDP1-209ENST00000554180 LAMA3Q16787 3333 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 CHD7Q9P2D1 2997 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 CTAGE15A4D2H0 777 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 M0QYT0 321 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 IRAK2O43187 625 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 CEP104O60308 925 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 SRGAP2O75044 1071 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 SLU7O95391 586 aaKnown RBP7.97□□□□□ -1.13
TDP1-209ENST00000554180 LRG1P02750 347 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 KRT1P04264 644 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 C8AP07357 584 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 HNRNPA1P09651 372 aaKnown RBP eCLIP7.97□□□□□ -1.13
TDP1-209ENST00000554180 CTAGE8P0CG41 777 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 PYGMP11217 842 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 TCF4P15884 667 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 IL1R2P27930 398 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 CXCR5P32302 372 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 CXCR3P49682 368 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 KPNA1P52294 538 aaPredicted RBP7.97□□□□□ -1.13
TDP1-209ENST00000554180 DEUP1Q05D60 604 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 TWF1Q12792 350 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 IFRD2Q12894 506 aaPredicted RBP7.97□□□□□ -1.13
TDP1-209ENST00000554180 EIF4EBP2Q13542 120 aaPredicted RBP7.97□□□□□ -1.13
TDP1-209ENST00000554180 MTMR3Q13615 1198 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 PDK2Q15119 407 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 DPYSL2Q16555 572 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 ARL13BQ3SXY8 428 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 PABPC1LQ4VXU2 614 aaKnown RBP7.97□□□□□ -1.13
TDP1-209ENST00000554180 ODF2Q5BJF6 829 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 TFDP3Q5H9I0 405 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 BRMS1LQ5PSV4 323 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 ACBD5Q5T8D3 534 aaPredicted RBP7.97□□□□□ -1.13
TDP1-209ENST00000554180 SH3PXD2AQ5TCZ1 1133 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 DAB2IPQ5VWQ8 1189 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 CYP4V2Q6ZWL3 525 aaPredicted RBP7.97□□□□□ -1.13
TDP1-209ENST00000554180 RSRC2Q7L4I2 434 aaKnown RBP7.97□□□□□ -1.13
TDP1-209ENST00000554180 CTAGE6Q86UF2 777 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 TAC4Q86UU9 113 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 MAP7D3Q8IWC1 876 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 CTAGE4Q8IX94 777 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 ELMOD1Q8N336 334 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 STKLD1Q8NE28 680 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 CMASQ8NFW8 434 aaPredicted RBP7.97□□□□□ -1.13
TDP1-209ENST00000554180 SLC7A14Q8TBB6 771 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 GPR152Q8TDT2 470 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 GIPC2Q8TF65 315 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 MAIP1Q8WWC4 291 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 EDEM1Q92611 657 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 PPP2R3CQ969Q6 453 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 TIFAQ96CG3 184 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 CAPZA3Q96KX2 299 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 CDCA3Q99618 268 aaPredicted RBP7.97□□□□□ -1.13
TDP1-209ENST00000554180 ADAM33Q9BZ11 813 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 FAM204AQ9H8W3 233 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 NMUR1Q9HB89 426 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 WDR6Q9NNW5 1121 aaKnown RBP7.97□□□□□ -1.13
TDP1-209ENST00000554180 DDIT4Q9NX09 232 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 RCOR3Q9P2K3 495 aaPredicted RBP7.97□□□□□ -1.13
TDP1-209ENST00000554180 EFR3BQ9Y2G0 817 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 PLXNA4Q9HCM2 1894 aa7.97□□□□□ -1.13
TDP1-209ENST00000554180 TMEM265A0A087WTH1 108 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 GOLGA6L10A0A0M3HER8 536 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 LRRD1A4D1F6 860 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 ZNF840PA6NDX5 716 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 CCDC188H7C350 402 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 RIOK3O14730 519 aaKnown RBP7.96□□□□□ -1.14
TDP1-209ENST00000554180 ZNF185O15231 689 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 TLR5O60602 858 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 CLASP2O75122 1294 aaKnown RBP7.96□□□□□ -1.14
TDP1-209ENST00000554180 ZMYND10O75800 440 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 PAPLNO95428 1278 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 FGF19O95750 216 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 FGGP02679 453 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 RARAP10276 462 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 SLC2A3P11169 496 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 PFKLP17858 780 aa7.96□□□□□ -1.14
TDP1-209ENST00000554180 TFE3P19532 575 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms