RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 RIN3Q8TB24 985 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 CRELD1Q96HD1 420 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 ACAP3Q96P50 834 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 GCNAQ96QF7 691 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 CAPN10Q9HC96 672 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 LRRC4CQ9HCJ2 640 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 PTPRHQ9HD43 1115 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 CRIM1Q9NZV1 1036 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 PCDHA12Q9UN75 941 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 APOBEC2Q9Y235 224 aaKnown RBP7.43□□□□□ -1.22
ATXN3-224ENST00000554040 TIMM13Q9Y5L4 95 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-224ENST00000554040 PDCD11Q14690 1871 aaKnown RBP7.43□□□□□ -1.22
ATXN3-224ENST00000554040 PTPRQQ9UMZ3 2332 aa7.43□□□□□ -1.22
ATXN3-224ENST00000554040 K7EQS6 105 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 DEXIO95424 95 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 LARGE1O95461 756 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 HNRNPLP14866 589 aaKnown RBP eCLIP7.42□□□□□ -1.22
ATXN3-224ENST00000554040 CYP11B2P19099 503 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 DDX6P26196 483 aaKnown RBP eCLIP7.42□□□□□ -1.22
ATXN3-224ENST00000554040 PDIA3P30101 505 aaKnown RBP7.42□□□□□ -1.22
ATXN3-224ENST00000554040 EFNA5P52803 228 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 CYP27A1Q02318 531 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 CYP4F3Q08477 520 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 BYSLQ13895 437 aaKnown RBP7.42□□□□□ -1.22
ATXN3-224ENST00000554040 ZNF268Q14587 947 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-224ENST00000554040 PPP2R5AQ15172 486 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 C2orf27AQ580R0 203 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 LMBRD2Q68DH5 695 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-224ENST00000554040 ARMCX5Q6P1M9 558 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 TMPRSS7Q7RTY8 843 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 RABEPKQ7Z6M1 372 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 USP37Q86T82 979 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 TMEM150AQ86TG1 271 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 SLCO6A1Q86UG4 719 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 TTC30AQ86WT1 665 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 LURAP1LQ8IV03 231 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 TP53INP2Q8IXH6 220 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 ZNF843Q8N446 348 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 CPA6Q8N4T0 437 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 TTC9BQ8N6N2 239 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 MAB21L3Q8N8X9 362 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 OR2I1PQ8NGU4 316 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 EPS8L3Q8TE67 593 aaKnown RBP7.42□□□□□ -1.22
ATXN3-224ENST00000554040 OSCP1Q8WVF1 389 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 ACO2Q99798 780 aaKnown RBP7.42□□□□□ -1.22
ATXN3-224ENST00000554040 KIFC3Q9BVG8 833 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 AGXT2Q9BYV1 514 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 CDT1Q9H211 546 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 KIF9Q9HAQ2 790 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 NCOA5Q9HCD5 579 aaKnown RBP7.42□□□□□ -1.22
ATXN3-224ENST00000554040 DUS2Q9NX74 493 aaKnown RBP7.42□□□□□ -1.22
ATXN3-224ENST00000554040 KIAA1522Q9P206 1035 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-224ENST00000554040 MMP17Q9ULZ9 603 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 KCNJ14Q9UNX9 436 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 U3KQE9 123 aa7.42□□□□□ -1.22
ATXN3-224ENST00000554040 PLXNB3Q9ULL4 1909 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 TENM4Q6N022 2769 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 ANTXRLA6NF34 631 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 J3QKU1 62 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 K7ERI5 159 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 CBFA2T3O75081 653 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 GJB3O75712 270 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 SYPP08247 313 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 TYMPP19971 482 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 HSPA4P34932 840 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 AARSP49588 968 aaKnown RBP eCLIP7.41□□□□□ -1.22
ATXN3-224ENST00000554040 EVCP57679 992 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 MRPS21P82921 87 aaKnown RBP7.41□□□□□ -1.22
ATXN3-224ENST00000554040 MTF1Q14872 753 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 VEPH1Q14D04 833 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 TAF12Q16514 161 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 ZNF568Q3ZCX4 644 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 DIEXFQ68CQ4 756 aaKnown RBP7.41□□□□□ -1.22
ATXN3-224ENST00000554040 TXNDC8Q6A555 127 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 PIK3AP1Q6ZUJ8 805 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 GLRX5Q86SX6 157 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 MON1AQ86VX9 555 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 CCDC33Q8N5R6 958 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 GIPC2Q8TF65 315 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 ATP2A3Q93084 1043 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 ALKBH8Q96BT7 664 aaKnown RBP7.41□□□□□ -1.22
ATXN3-224ENST00000554040 IFT74Q96LB3 600 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 AIFM3Q96NN9 605 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 FANCD2OSQ96PS1 177 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 SEPT5Q99719 369 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-224ENST00000554040 TTC12Q9H892 705 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-224ENST00000554040 ATXN2Q99700 1313 aaKnown RBP7.41□□□□□ -1.22
ATXN3-224ENST00000554040 CABIN1Q9Y6J0 2220 aa7.41□□□□□ -1.22
ATXN3-224ENST00000554040 USP9XQ93008 2570 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-224ENST00000554040 COL6A6A6NMZ7 2263 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 TRABD2BA6NFA1 517 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 AP5Z1O43299 807 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 MCF2P10911 925 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 HMGA1P17096 107 aaKnown RBP7.4□□□□□ -1.22
ATXN3-224ENST00000554040 ATF6P18850 670 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 PROZP22891 400 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 LRPAP1P30533 357 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 ABCG1P45844 678 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 FAM160A1Q05DH4 1040 aa7.4□□□□□ -1.22
ATXN3-224ENST00000554040 ZNF33AQ06730 810 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms