RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 SRGAP2BP0DMP2 458 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 RARGP13631 454 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 MIPP30301 263 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 IRS1P35568 1242 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 GJC1P36383 396 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 KPNA1P52294 538 aaPredicted RBP10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 USP46P62068 366 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 ZNF252P-AS1Q0IIN9 211 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 NME3Q13232 169 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 MTMR3Q13615 1198 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 WHAMMP3Q1A5X7 153 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 C15orf59Q2T9L4 293 aaPredicted RBP10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 SYPL2Q5VXT5 272 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 HFE2Q6ZVN8 426 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 SPRED2Q7Z698 418 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 SCD5Q86SK9 330 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 SPNS2Q8IVW8 549 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 MAP7D3Q8IWC1 876 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 RCOR2Q8IZ40 523 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 MNS1Q8NEH6 495 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 CENPIQ92674 756 aaPredicted RBP10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 CD101Q93033 1021 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 TRMT2BQ96GJ1 504 aaKnown RBP10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 MYRFLQ96LU7 910 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 SERPINB11Q96P15 392 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 TBCBQ99426 244 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 NPY6RQ99463 290 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 ZWILCHQ9H900 591 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 DDIT4Q9NX09 232 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 COX16Q9P0S2 106 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 PCSK1NQ9UHG2 260 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 SLC12A6Q9UHW9 1150 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 PTPRSQ13332 1948 aa10.91□□□□□ -0.66
TMEM55B-205ENST00000554028 DDX3YO15523 660 aaKnown RBP10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 ZMYND10O75800 440 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 ENDOD1O94919 500 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 TRUB2O95900 331 aaKnown RBP10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 SLC2A3P11169 496 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 PTPN2P17706 415 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 HOXA9P31269 272 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 CXCR5P32302 372 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 ATP5C1P36542 298 aaKnown RBP10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 PEX5P50542 639 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 AIF1P55008 147 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 MTA1Q13330 715 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 CAMK1Q14012 370 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 C10orf120Q5SQS8 335 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 HECTD3Q5T447 861 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 ERMARDQ5T6L9 678 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 BHLHA9Q7RTU4 235 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 RBM23Q86U06 439 aaKnown RBP10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 PSTKQ8IV42 348 aaKnown RBP10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 CCDC50Q8IVM0 306 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 KATNAL2Q8IYT4 538 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 CEP112Q8N8E3 955 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 KCTD6Q8NC69 237 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 EXD1Q8NHP7 514 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 GDPD5Q8WTR4 605 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 TEKT4Q8WW24 435 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 MAIP1Q8WWC4 291 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 MRPS31Q92665 395 aaKnown RBP10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 NT5C3BQ969T7 300 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 MRPL38Q96DV4 380 aaKnown RBP10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 PGAP3Q96FM1 320 aaPredicted RBP10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 WDCPQ9H6R7 721 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 MAN1C1Q9NR34 630 aa10.9□□□□□ -0.66
TMEM55B-205ENST00000554028 VWA8A3KMH1 1905 aa10.9□□□□□ -0.67
TMEM55B-205ENST00000554028 PER2O15055 1255 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 SRGAP2O75044 1071 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 KRT1P04264 644 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 FYNP06241 537 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 ZDHHC11BP0C7U3 371 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 HMGA1P17096 107 aaKnown RBP10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 CDC25CP30307 473 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 CCR1P32246 355 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 HDAC4P56524 1084 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 TAS2R40P59535 323 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 COPS2P61201 443 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 AMPD2Q01433 879 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 KRT81Q14533 505 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 PDK2Q15119 407 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 DUSP6Q16828 381 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 LRIT3Q3SXY7 679 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 EFHC2Q5JST6 749 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 BRMS1LQ5PSV4 323 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 SH3PXD2AQ5TCZ1 1133 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 SNX30Q5VWJ9 437 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 TRNP1Q6NT89 227 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 MSANTD2Q6P1R3 559 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 ZNF276Q8N554 614 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 LEMD2Q8NC56 503 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 DQX1Q8TE96 717 aaKnown RBP10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 SLC22A17Q8WUG5 538 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 HSPH1Q92598 858 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 KRT35Q92764 455 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 RPGRIP1Q96KN7 1286 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 CAPZA3Q96KX2 299 aa10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 MAK16Q9BXY0 300 aaKnown RBP10.89□□□□□ -0.67
TMEM55B-205ENST00000554028 SMOC2Q9H3U7 446 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms