RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 DNAJC7Q99615 494 aa14.48□□□□□ -0.09
TUBB3-202ENST00000553656 DEF6Q9H4E7 631 aa14.48□□□□□ -0.09
TUBB3-202ENST00000553656 ABHD10Q9NUJ1 306 aa14.48□□□□□ -0.09
TUBB3-202ENST00000553656 WDR35Q9P2L0 1181 aa14.48□□□□□ -0.09
TUBB3-202ENST00000553656 LSM7Q9UK45 103 aaKnown RBP14.48□□□□□ -0.09
TUBB3-202ENST00000553656 FBXL21Q9UKT6 434 aa14.48□□□□□ -0.09
TUBB3-202ENST00000553656 C5orf42Q9H799 3197 aa14.48□□□□□ -0.09
TUBB3-202ENST00000553656 SLC12A8A0AV02 714 aa14.47□□□□□ -0.09
TUBB3-202ENST00000553656 GOLGA6L3A6NEY3 463 aa14.47□□□□□ -0.09
TUBB3-202ENST00000553656 TMCO5BA8MYB1 307 aa14.47□□□□□ -0.09
TUBB3-202ENST00000553656 GOLGA8SH3BPF8 625 aa14.47□□□□□ -0.09
TUBB3-202ENST00000553656 SLC9A3R1O14745 358 aaPredicted RBP14.47□□□□□ -0.09
TUBB3-202ENST00000553656 CHADO15335 359 aa14.47□□□□□ -0.09
TUBB3-202ENST00000553656 HNRNPH3P31942 346 aaKnown RBP14.47□□□□□ -0.09
TUBB3-202ENST00000553656 SCNN1AP37088 669 aa14.47□□□□□ -0.09
TUBB3-202ENST00000553656 KPNA1P52294 538 aaPredicted RBP14.47□□□□□ -0.09
TUBB3-202ENST00000553656 ADKP55263 362 aaKnown RBP14.47□□□□□ -0.09
TUBB3-202ENST00000553656 GPC5P78333 572 aa14.47□□□□□ -0.09
TUBB3-202ENST00000553656 C1QBPQ07021 282 aaKnown RBP14.47□□□□□ -0.09
TUBB3-202ENST00000553656 FCHO2Q0JRZ9 810 aa14.47□□□□□ -0.09
TUBB3-202ENST00000553656 TBX2Q13207 712 aaPredicted RBP14.47□□□□□ -0.09
TUBB3-202ENST00000553656 PDGFRLQ15198 375 aa14.47□□□□□ -0.09
TUBB3-202ENST00000553656 C2CD6Q53TS8 623 aa14.47□□□□□ -0.09
TUBB3-202ENST00000553656 MSANTD2Q6P1R3 559 aa14.47□□□□□ -0.09
TUBB3-202ENST00000553656 XYLT1Q86Y38 959 aa14.47□□□□□ -0.09
TUBB3-202ENST00000553656 KIAA1958Q8N8K9 716 aa14.47□□□□□ -0.09
TUBB3-202ENST00000553656 CSGALNACT1Q8TDX6 532 aa14.47□□□□□ -0.09
TUBB3-202ENST00000553656 SYT11Q9BT88 431 aa14.47□□□□□ -0.09
TUBB3-202ENST00000553656 KLF16Q9BXK1 252 aaPredicted RBP14.47□□□□□ -0.09
TUBB3-202ENST00000553656 GKN1Q9NS71 199 aa14.47□□□□□ -0.09
TUBB3-202ENST00000553656 HELZP42694 1942 aaKnown RBP14.47□□□□□ -0.09
TUBB3-202ENST00000553656 E2F8A0AVK6 867 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 DDX3XO00571 662 aaKnown RBP eCLIP14.46□□□□□ -0.092e-8■■□□□ 13.3
TUBB3-202ENST00000553656 NARSO43776 548 aaKnown RBP14.46□□□□□ -0.09
TUBB3-202ENST00000553656 DAB1O75553 588 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 GRAP2O75791 330 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 HMBSP08397 361 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 GZMAP12544 262 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 CDC25BP30305 580 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 RNASE9P60153 205 aaKnown RBP14.46□□□□□ -0.09
TUBB3-202ENST00000553656 ZXDAP98168 799 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 CDK17Q00537 523 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 ARID5BQ14865 1188 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 DCAF6Q58WW2 860 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 HGSNATQ68CP4 663 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 OSCP1Q8WVF1 389 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 DNASE1L2Q92874 299 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 TRIM11Q96F44 468 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 PIWIL1Q96J94 861 aaKnown RBP14.46□□□□□ -0.09
TUBB3-202ENST00000553656 ZFRQ96KR1 1074 aaKnown RBP14.46□□□□□ -0.09
TUBB3-202ENST00000553656 SERPINB11Q96P15 392 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 LRRC3BQ96PB8 259 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 SMOC2Q9H3U7 446 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 FAM204AQ9H8W3 233 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 SLC2A4RGQ9NR83 387 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 DUS2Q9NX74 493 aaKnown RBP14.46□□□□□ -0.09
TUBB3-202ENST00000553656 TBC1D14Q9P2M4 693 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 ADAMTS1Q9UHI8 967 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 SFMBT1Q9UHJ3 866 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 STAP1Q9ULZ2 295 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 NAALADL1Q9UQQ1 740 aa14.46□□□□□ -0.09
TUBB3-202ENST00000553656 HBS1LQ9Y450 684 aaKnown RBP14.46□□□□□ -0.09
TUBB3-202ENST00000553656 ANKRD62A6NC57 917 aa14.45□□□□□ -0.1
TUBB3-202ENST00000553656 AKR1B10O60218 316 aa14.45□□□□□ -0.1
TUBB3-202ENST00000553656 RTN2O75298 545 aa14.45□□□□□ -0.1
TUBB3-202ENST00000553656 PLEKP08567 350 aaPredicted RBP14.45□□□□□ -0.1
TUBB3-202ENST00000553656 GBP1P32455 592 aa14.45□□□□□ -0.1
TUBB3-202ENST00000553656 HARS2P49590 506 aaKnown RBP14.45□□□□□ -0.1
TUBB3-202ENST00000553656 ZXDBP98169 803 aa14.45□□□□□ -0.1
TUBB3-202ENST00000553656 TAF5Q15542 800 aa14.45□□□□□ -0.1
TUBB3-202ENST00000553656 DNAJC24Q6P3W2 148 aa14.45□□□□□ -0.1
TUBB3-202ENST00000553656 MON1BQ7L1V2 547 aa14.45□□□□□ -0.1
TUBB3-202ENST00000553656 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.45□□□□□ -0.1
TUBB3-202ENST00000553656 DEFB106AQ8N104 65 aa14.45□□□□□ -0.1
TUBB3-202ENST00000553656 CPA6Q8N4T0 437 aa14.45□□□□□ -0.1
TUBB3-202ENST00000553656 DQX1Q8TE96 717 aaKnown RBP14.45□□□□□ -0.1
TUBB3-202ENST00000553656 ATP2A3Q93084 1043 aa14.45□□□□□ -0.1
TUBB3-202ENST00000553656 PLD4Q96BZ4 506 aa14.45□□□□□ -0.1
TUBB3-202ENST00000553656 VCPIP1Q96JH7 1222 aa14.45□□□□□ -0.1
TUBB3-202ENST00000553656 ZFYVE19Q96K21 471 aa14.45□□□□□ -0.1
TUBB3-202ENST00000553656 SLC2A13Q96QE2 648 aa14.45□□□□□ -0.1
TUBB3-202ENST00000553656 SELENOOQ9BVL4 669 aa14.45□□□□□ -0.1
TUBB3-202ENST00000553656 DCLK3Q9C098 648 aa14.45□□□□□ -0.1
TUBB3-202ENST00000553656 METTL5Q9NRN9 209 aaKnown RBP14.45□□□□□ -0.1
TUBB3-202ENST00000553656 RRN3Q9NYV6 651 aa14.45□□□□□ -0.1
TUBB3-202ENST00000553656 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.45□□□□□ -0.1
TUBB3-202ENST00000553656 ARHGAP20Q9P2F6 1191 aa14.45□□□□□ -0.1
TUBB3-202ENST00000553656 WNT6Q9Y6F9 365 aa14.45□□□□□ -0.1
TUBB3-202ENST00000553656 SSU72P8A0A1W2PR75 194 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 SCAMP3O14828 347 aaKnown RBP14.44□□□□□ -0.1
TUBB3-202ENST00000553656 MSI1O43347 362 aaKnown RBP14.44□□□□□ -0.1
TUBB3-202ENST00000553656 STC2O76061 302 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 NFATC1O95644 943 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 FTLP02792 175 aaPredicted RBP14.44□□□□□ -0.1
TUBB3-202ENST00000553656 FYNP06241 537 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 MYBL1P10243 752 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 DESP17661 470 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 NOS2P35228 1153 aa14.44□□□□□ -0.1
TUBB3-202ENST00000553656 EIF4A3P38919 411 aaKnown RBP14.44□□□□□ -0.1
TUBB3-202ENST00000553656 MATKP42679 507 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms