RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 POSTNQ15063 836 aa14.65□□□□□ -0.06
PRPF39-204ENST00000553605 PKDCCQ504Y2 493 aa14.65□□□□□ -0.06
PRPF39-204ENST00000553605 HES3Q5TGS1 186 aa14.65□□□□□ -0.06
PRPF39-204ENST00000553605 LIMS2Q7Z4I7 341 aa14.65□□□□□ -0.06
PRPF39-204ENST00000553605 GPBP1Q86WP2 473 aa14.65□□□□□ -0.06
PRPF39-204ENST00000553605 NUP93Q8N1F7 819 aa14.65□□□□□ -0.06
PRPF39-204ENST00000553605 KRI1Q8N9T8 703 aaKnown RBP14.65□□□□□ -0.06
PRPF39-204ENST00000553605 OVCA2Q8WZ82 227 aa14.65□□□□□ -0.06
PRPF39-204ENST00000553605 FBXO32Q969P5 355 aa14.65□□□□□ -0.06
PRPF39-204ENST00000553605 FAM213AQ9BRX8 229 aa14.65□□□□□ -0.06
PRPF39-204ENST00000553605 TRIM9Q9C026 710 aa14.65□□□□□ -0.06
PRPF39-204ENST00000553605 IKZF4Q9H2S9 585 aa14.65□□□□□ -0.06
PRPF39-204ENST00000553605 CCSER2Q9H7U1 834 aa14.65□□□□□ -0.06
PRPF39-204ENST00000553605 OSGEPQ9NPF4 335 aa14.65□□□□□ -0.06
PRPF39-204ENST00000553605 MARK1Q9P0L2 795 aa14.65□□□□□ -0.06
PRPF39-204ENST00000553605 TMEM131Q92545 1883 aa14.65□□□□□ -0.06
PRPF39-204ENST00000553605 DFNA5O60443 496 aa14.64□□□□□ -0.07
PRPF39-204ENST00000553605 SYNCRIPO60506 623 aaKnown RBP14.64□□□□□ -0.07
PRPF39-204ENST00000553605 RTN3O95197 1032 aaPredicted RBP14.64□□□□□ -0.07
PRPF39-204ENST00000553605 CACNA2D1P54289 1103 aa14.64□□□□□ -0.07
PRPF39-204ENST00000553605 DNAJC3Q13217 504 aa14.64□□□□□ -0.07
PRPF39-204ENST00000553605 ORC1Q13415 861 aa14.64□□□□□ -0.07
PRPF39-204ENST00000553605 DHX8Q14562 1220 aaKnown RBP14.64□□□□□ -0.07
PRPF39-204ENST00000553605 TBC1D25Q3MII6 688 aa14.64□□□□□ -0.07
PRPF39-204ENST00000553605 TMEM119Q4V9L6 283 aa14.64□□□□□ -0.07
PRPF39-204ENST00000553605 MDH1BQ5I0G3 518 aa14.64□□□□□ -0.07
PRPF39-204ENST00000553605 SNX30Q5VWJ9 437 aa14.64□□□□□ -0.07
PRPF39-204ENST00000553605 FBXL19Q6PCT2 694 aa14.64□□□□□ -0.07
PRPF39-204ENST00000553605 LAYNQ6UX15 382 aa14.64□□□□□ -0.07
PRPF39-204ENST00000553605 HTR3DQ70Z44 454 aa14.64□□□□□ -0.07
PRPF39-204ENST00000553605 FAM124AQ86V42 546 aa14.64□□□□□ -0.07
PRPF39-204ENST00000553605 ERICH1Q86X53 443 aa14.64□□□□□ -0.07
PRPF39-204ENST00000553605 FBXO18Q8NFZ0 1043 aa14.64□□□□□ -0.07
PRPF39-204ENST00000553605 FAM84AQ96KN4 292 aa14.64□□□□□ -0.07
PRPF39-204ENST00000553605 CNDP2Q96KP4 475 aaKnown RBP14.64□□□□□ -0.07
PRPF39-204ENST00000553605 LGMNQ99538 433 aa14.64□□□□□ -0.07
PRPF39-204ENST00000553605 NACA2Q9H009 215 aa14.64□□□□□ -0.07
PRPF39-204ENST00000553605 C6orf106Q9H6K1 298 aaPredicted RBP14.64□□□□□ -0.07
PRPF39-204ENST00000553605 TMEM30AQ9NV96 361 aa14.64□□□□□ -0.07
PRPF39-204ENST00000553605 SIX4Q9UIU6 781 aa14.64□□□□□ -0.07
PRPF39-204ENST00000553605 R3HCC1Q9Y3T6 440 aaKnown RBP14.64□□□□□ -0.07
PRPF39-204ENST00000553605 PIEZO2Q9H5I5 2752 aa14.64□□□□□ -0.07
PRPF39-204ENST00000553605 CBX4O00257 560 aa14.63□□□□□ -0.07
PRPF39-204ENST00000553605 NPC1O15118 1278 aa14.63□□□□□ -0.07
PRPF39-204ENST00000553605 WARSP23381 471 aaKnown RBP14.63□□□□□ -0.07
PRPF39-204ENST00000553605 CTSKP43235 329 aa14.63□□□□□ -0.07
PRPF39-204ENST00000553605 CSRP3P50461 194 aa14.63□□□□□ -0.07
PRPF39-204ENST00000553605 TUBP50607 506 aa14.63□□□□□ -0.07
PRPF39-204ENST00000553605 TMPRSS3P57727 454 aa14.63□□□□□ -0.07
PRPF39-204ENST00000553605 ENPP2Q13822 863 aa14.63□□□□□ -0.07
PRPF39-204ENST00000553605 KCNT1Q5JUK3 1230 aa14.63□□□□□ -0.07
PRPF39-204ENST00000553605 ARHGAP40Q5TG30 622 aa14.63□□□□□ -0.07
PRPF39-204ENST00000553605 BROXQ5VW32 411 aa14.63□□□□□ -0.07
PRPF39-204ENST00000553605 GATAD2AQ86YP4 633 aa14.63□□□□□ -0.07
PRPF39-204ENST00000553605 BRSK2Q8IWQ3 736 aa14.63□□□□□ -0.07
PRPF39-204ENST00000553605 HPDLQ96IR7 371 aa14.63□□□□□ -0.07
PRPF39-204ENST00000553605 ST6GALNAC4Q9H4F1 302 aa14.63□□□□□ -0.07
PRPF39-204ENST00000553605 CPNE5Q9HCH3 593 aa14.63□□□□□ -0.07
PRPF39-204ENST00000553605 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.63□□□□□ -0.07
PRPF39-204ENST00000553605 THAP10Q9P2Z0 257 aaPredicted RBP14.63□□□□□ -0.07
PRPF39-204ENST00000553605 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.63□□□□□ -0.07
PRPF39-204ENST00000553605 COL12A1Q99715 3063 aa14.62□□□□□ -0.07
PRPF39-204ENST00000553605 COL5A1P20908 1838 aaPredicted RBP14.62□□□□□ -0.07
PRPF39-204ENST00000553605 A0A1B0GTQ1 180 aa14.62□□□□□ -0.07
PRPF39-204ENST00000553605 GREM1O60565 184 aa14.62□□□□□ -0.07
PRPF39-204ENST00000553605 KRT18P05783 430 aaKnown RBP14.62□□□□□ -0.07
PRPF39-204ENST00000553605 ACO1P21399 889 aaKnown RBP14.62□□□□□ -0.07
PRPF39-204ENST00000553605 ACSL1P33121 698 aa14.62□□□□□ -0.07
PRPF39-204ENST00000553605 GNL1P36915 607 aaPredicted RBP14.62□□□□□ -0.07
PRPF39-204ENST00000553605 ACADVLP49748 655 aa14.62□□□□□ -0.07
PRPF39-204ENST00000553605 COPAP53621 1224 aa14.62□□□□□ -0.07
PRPF39-204ENST00000553605 UCNP55089 124 aa14.62□□□□□ -0.07
PRPF39-204ENST00000553605 ADAT2Q7Z6V5 191 aaKnown RBP14.62□□□□□ -0.07
PRPF39-204ENST00000553605 CACUL1Q86Y37 369 aa14.62□□□□□ -0.07
PRPF39-204ENST00000553605 ZNF248Q8NDW4 579 aa14.62□□□□□ -0.07
PRPF39-204ENST00000553605 ZSWIM2Q8NEG5 633 aa14.62□□□□□ -0.07
PRPF39-204ENST00000553605 BHMTQ93088 406 aa14.62□□□□□ -0.07
PRPF39-204ENST00000553605 SAAL1Q96ER3 474 aa14.62□□□□□ -0.07
PRPF39-204ENST00000553605 NAF1Q96HR8 494 aaKnown RBP14.62□□□□□ -0.07
PRPF39-204ENST00000553605 MMS19Q96T76 1030 aa14.62□□□□□ -0.07
PRPF39-204ENST00000553605 ZNF518BQ9C0D4 1074 aa14.62□□□□□ -0.07
PRPF39-204ENST00000553605 MTMR12Q9C0I1 747 aa14.62□□□□□ -0.07
PRPF39-204ENST00000553605 ELOVL4Q9GZR5 314 aa14.62□□□□□ -0.07
PRPF39-204ENST00000553605 RBAKQ9NYW8 714 aaPredicted RBP14.62□□□□□ -0.07
PRPF39-204ENST00000553605 FBXO10Q9UK96 956 aa14.62□□□□□ -0.07
PRPF39-204ENST00000553605 MYLKQ15746 1914 aa14.61□□□□□ -0.07
PRPF39-204ENST00000553605 TBCAO75347 108 aaKnown RBP14.61□□□□□ -0.07
PRPF39-204ENST00000553605 ITGAVP06756 1048 aa14.61□□□□□ -0.07
PRPF39-204ENST00000553605 TMEM191BP0C7N4 346 aa14.61□□□□□ -0.07
PRPF39-204ENST00000553605 PTPN1P18031 435 aaKnown RBP14.61□□□□□ -0.07
PRPF39-204ENST00000553605 CDH8P55286 799 aa14.61□□□□□ -0.07
PRPF39-204ENST00000553605 ST3GAL1Q11201 340 aa14.61□□□□□ -0.07
PRPF39-204ENST00000553605 SCAMP5Q8TAC9 235 aa14.61□□□□□ -0.07
PRPF39-204ENST00000553605 TTC9Q92623 222 aa14.61□□□□□ -0.07
PRPF39-204ENST00000553605 BIRC7Q96CA5 298 aa14.61□□□□□ -0.07
PRPF39-204ENST00000553605 MED8Q96G25 268 aa14.61□□□□□ -0.07
PRPF39-204ENST00000553605 SNX25Q9H3E2 840 aa14.61□□□□□ -0.07
PRPF39-204ENST00000553605 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.61□□□□□ -0.07
PRPF39-204ENST00000553605 PLK2Q9NYY3 685 aa14.61□□□□□ -0.07
PRPF39-204ENST00000553605 PTPRJQ12913 1337 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms