RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 RASAL2Q9UJF2 1139 aa13.6□□□□□ -0.23
ACTN1-207ENST00000553290 STRIP2Q9ULQ0 834 aa13.6□□□□□ -0.23
ACTN1-207ENST00000553290 TBC1D3BA6NDS4 549 aa13.59□□□□□ -0.23
ACTN1-207ENST00000553290 TULP2O00295 520 aa13.59□□□□□ -0.23
ACTN1-207ENST00000553290 TULP3O75386 442 aa13.59□□□□□ -0.23
ACTN1-207ENST00000553290 MESP2Q0VG99 397 aa13.59□□□□□ -0.23
ACTN1-207ENST00000553290 EFEMP1Q12805 493 aa13.59□□□□□ -0.23
ACTN1-207ENST00000553290 CNGA2Q16280 664 aa13.59□□□□□ -0.23
ACTN1-207ENST00000553290 PKDCCQ504Y2 493 aa13.59□□□□□ -0.23
ACTN1-207ENST00000553290 RSRC2Q7L4I2 434 aaKnown RBP13.59□□□□□ -0.23
ACTN1-207ENST00000553290 RRAGAQ7L523 313 aa13.59□□□□□ -0.23
ACTN1-207ENST00000553290 SCML4Q8N228 414 aa13.59□□□□□ -0.23
ACTN1-207ENST00000553290 FAM160A2Q8N612 972 aaPredicted RBP13.59□□□□□ -0.23
ACTN1-207ENST00000553290 TSTD1Q8NFU3 115 aa13.59□□□□□ -0.23
ACTN1-207ENST00000553290 UBA3Q8TBC4 463 aa13.59□□□□□ -0.23
ACTN1-207ENST00000553290 TFAP2BQ92481 460 aa13.59□□□□□ -0.23
ACTN1-207ENST00000553290 LOXL4Q96JB6 756 aa13.59□□□□□ -0.23
ACTN1-207ENST00000553290 IPO9Q96P70 1041 aaKnown RBP13.59□□□□□ -0.23
ACTN1-207ENST00000553290 BBS2Q9BXC9 721 aa13.59□□□□□ -0.23
ACTN1-207ENST00000553290 ULBP1Q9BZM6 244 aa13.59□□□□□ -0.23
ACTN1-207ENST00000553290 OLA1Q9NTK5 396 aaKnown RBP13.59□□□□□ -0.23
ACTN1-207ENST00000553290 MARK1Q9P0L2 795 aa13.59□□□□□ -0.23
ACTN1-207ENST00000553290 MARCH2Q9P0N8 246 aa13.59□□□□□ -0.23
ACTN1-207ENST00000553290 USP18Q9UMW8 372 aa13.59□□□□□ -0.23
ACTN1-207ENST00000553290 EML5Q05BV3 1969 aa13.59□□□□□ -0.23
ACTN1-207ENST00000553290 SPAG17Q6Q759 2223 aa13.59□□□□□ -0.23
ACTN1-207ENST00000553290 DCHS1Q96JQ0 3298 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 RALGAPA1Q6GYQ0 2036 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 PRR5-ARHGAP8B1AHC4 643 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 NEDD8-MDP1E9PL57 170 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 RNF225M0QZC1 329 aaPredicted RBP13.58□□□□□ -0.24
ACTN1-207ENST00000553290 CACNG3O60359 315 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 ALDH1A2O94788 518 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 KLF8O95600 359 aaPredicted RBP13.58□□□□□ -0.24
ACTN1-207ENST00000553290 TYRP14679 529 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 SDHBP21912 280 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 TGM1P22735 817 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 TIE1P35590 1138 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 CHKAP35790 457 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 KIR2DL1P43626 348 aaPredicted RBP13.58□□□□□ -0.24
ACTN1-207ENST00000553290 DGKEP52429 567 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 ARHGAP8P85298 464 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 LMNB2Q03252 620 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 SPEM2Q0P670 501 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 ADIGQ0VDE8 80 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 CRY1Q16526 586 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 EOGTQ5NDL2 527 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 EMC10Q5UCC4 262 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 GRAMD4Q6IC98 578 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 TPGS1Q6ZTW0 290 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 TRMT11Q7Z4G4 463 aaKnown RBP13.58□□□□□ -0.24
ACTN1-207ENST00000553290 ARHGEF19Q8IW93 802 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 SFTPA1Q8IWL2 248 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 SIX6OS1Q8N1H7 587 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 CCDC33Q8N5R6 958 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 ALLCQ8N6M5 410 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 TERB1Q8NA31 727 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 IL17RCQ8NAC3 791 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 TXNDC5Q8NBS9 432 aaKnown RBP13.58□□□□□ -0.24
ACTN1-207ENST00000553290 RBBP8NLQ8NC74 664 aaPredicted RBP13.58□□□□□ -0.24
ACTN1-207ENST00000553290 SLC35F5Q8WV83 523 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 KAT5Q92993 513 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 CNOT6LQ96LI5 555 aaKnown RBP13.58□□□□□ -0.24
ACTN1-207ENST00000553290 INTS2Q9H0H0 1204 aaKnown RBP13.58□□□□□ -0.24
ACTN1-207ENST00000553290 CLSTN2Q9H4D0 955 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 CNGB3Q9NQW8 809 aa13.58□□□□□ -0.24
ACTN1-207ENST00000553290 DNAJC17Q9NVM6 304 aaKnown RBP13.58□□□□□ -0.24
ACTN1-207ENST00000553290 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.58□□□□□ -0.24
ACTN1-207ENST00000553290 ANTXRLA6NF34 631 aa13.57□□□□□ -0.24
ACTN1-207ENST00000553290 FOXD2O60548 495 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-207ENST00000553290 KLKB1P03952 638 aa13.57□□□□□ -0.24
ACTN1-207ENST00000553290 HMBSP08397 361 aa13.57□□□□□ -0.24
ACTN1-207ENST00000553290 CHRM1P11229 460 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-207ENST00000553290 ZNF132P52740 706 aa13.57□□□□□ -0.24
ACTN1-207ENST00000553290 PUM1Q14671 1186 aaKnown RBP eCLIP13.57□□□□□ -0.24
ACTN1-207ENST00000553290 USP39Q53GS9 565 aaKnown RBP13.57□□□□□ -0.24
ACTN1-207ENST00000553290 ENOSF1Q7L5Y1 443 aa13.57□□□□□ -0.24
ACTN1-207ENST00000553290 BHLHA9Q7RTU4 235 aa13.57□□□□□ -0.24
ACTN1-207ENST00000553290 ERMP1Q7Z2K6 904 aa13.57□□□□□ -0.24
ACTN1-207ENST00000553290 KBTBD6Q86V97 674 aa13.57□□□□□ -0.24
ACTN1-207ENST00000553290 C11orf74Q86VG3 221 aa13.57□□□□□ -0.24
ACTN1-207ENST00000553290 RASSF3Q86WH2 238 aa13.57□□□□□ -0.24
ACTN1-207ENST00000553290 CREBRFQ8IUR6 639 aa13.57□□□□□ -0.24
ACTN1-207ENST00000553290 RNF139Q8WU17 664 aa13.57□□□□□ -0.24
ACTN1-207ENST00000553290 PLD4Q96BZ4 506 aa13.57□□□□□ -0.24
ACTN1-207ENST00000553290 RMDN1Q96DB5 314 aa13.57□□□□□ -0.24
ACTN1-207ENST00000553290 ZC3H10Q96K80 434 aaKnown RBP13.57□□□□□ -0.24
ACTN1-207ENST00000553290 FAM81BQ96LP2 452 aa13.57□□□□□ -0.24
ACTN1-207ENST00000553290 POLMQ9NP87 494 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-207ENST00000553290 PARD6AQ9NPB6 346 aa13.57□□□□□ -0.24
ACTN1-207ENST00000553290 ABCC13Q9NSE7 274 aa13.57□□□□□ -0.24
ACTN1-207ENST00000553290 CNTN6Q9UQ52 1028 aa13.57□□□□□ -0.24
ACTN1-207ENST00000553290 STARD13Q9Y3M8 1113 aa13.57□□□□□ -0.24
ACTN1-207ENST00000553290 MYO18AQ92614 2054 aaKnown RBP13.57□□□□□ -0.24
ACTN1-207ENST00000553290 SLC12A8A0AV02 714 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 M0QYV0 167 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 SGK1O00141 431 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 LCP1P13796 627 aa13.56□□□□□ -0.24
ACTN1-207ENST00000553290 BRD2P25440 801 aaKnown RBP13.56□□□□□ -0.24
ACTN1-207ENST00000553290 CORO1AP31146 461 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms