RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 NUDT5Q9UKK9 219 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 CPQQ9Y646 472 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 DCHS1Q96JQ0 3298 aa13.74□□□□□ -0.21
CDK4-212ENST00000552388 MIA3Q5JRA6 1907 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 LEFTY2O00292 366 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 NARSO43776 548 aaKnown RBP13.73□□□□□ -0.21
CDK4-212ENST00000552388 SERPING1P05155 500 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 FYNP06241 537 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 TPM1P09493 284 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 SRFP11831 508 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 SKILP12757 684 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 TNFAIP3P21580 790 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 MMP8P22894 467 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 VCPP55072 806 aaKnown RBP13.73□□□□□ -0.21
CDK4-212ENST00000552388 YWHAZP63104 245 aaKnown RBP13.73□□□□□ -0.21
CDK4-212ENST00000552388 SLC6A3Q01959 620 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 GRM2Q14416 872 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 MTF1Q14872 753 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 ARHGAP29Q52LW3 1261 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 EFHC1Q5JVL4 640 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 C10orf120Q5SQS8 335 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 OR6B2Q6IFH4 312 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 MSANTD2Q6P1R3 559 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 OLFML1Q6UWY5 402 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 TOGARAM2Q6ZUX3 1019 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 DDX42Q86XP3 938 aaKnown RBP eCLIP13.73□□□□□ -0.21
CDK4-212ENST00000552388 PHF13Q86YI8 300 aaPredicted RBP13.73□□□□□ -0.21
CDK4-212ENST00000552388 DRC7Q8IY82 874 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 SH3RF2Q8TEC5 729 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 EDEM1Q92611 657 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 PIWIL1Q96J94 861 aaKnown RBP13.73□□□□□ -0.21
CDK4-212ENST00000552388 DNAJC7Q99615 494 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 TRIM62Q9BVG3 475 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 KLF16Q9BXK1 252 aaPredicted RBP13.73□□□□□ -0.21
CDK4-212ENST00000552388 SMOC2Q9H3U7 446 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 SEPT11Q9NVA2 429 aaKnown RBP13.73□□□□□ -0.21
CDK4-212ENST00000552388 MYOFQ9NZM1 2061 aa13.73□□□□□ -0.21
CDK4-212ENST00000552388 COL4A3Q01955 1670 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 VPS13AQ96RL7 3174 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 PROB1E7EW31 1015 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 MDM4O15151 490 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 CHADO15335 359 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 HSF2BPO75031 334 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 MFAP3LO75121 409 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 GZMAP12544 262 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 GDI1P31150 447 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 SCNN1AP37088 669 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 NSFP46459 744 aaKnown RBP13.72□□□□□ -0.21
CDK4-212ENST00000552388 GSCP56915 257 aaPredicted RBP13.72□□□□□ -0.21
CDK4-212ENST00000552388 GPC5P78333 572 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 EFEMP1Q12805 493 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 PTP4A2Q12974 167 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 PPP1R2P3Q6NXS1 205 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 WDR59Q6PJI9 974 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 RSRC2Q7L4I2 434 aaKnown RBP13.72□□□□□ -0.21
CDK4-212ENST00000552388 SLC26A9Q7LBE3 791 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 XYLT1Q86Y38 959 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 CNGA4Q8IV77 575 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 SUGP1Q8IWZ8 645 aaKnown RBP13.72□□□□□ -0.21
CDK4-212ENST00000552388 YAF2Q8IY57 180 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 OR8K1Q8NGG5 319 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 SLC30A5Q8TAD4 765 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 RNF139Q8WU17 664 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 IRF7Q92985 503 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 FAM149B1Q96BN6 582 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 POPDC2Q9HBU9 364 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 TRPV5Q9NQA5 729 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 ABHD10Q9NUJ1 306 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 THG1LQ9NWX6 298 aaKnown RBP13.72□□□□□ -0.21
CDK4-212ENST00000552388 SMPD4Q9NXE4 827 aa13.72□□□□□ -0.21
CDK4-212ENST00000552388 ARNTLO00327 626 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 DDX3XO00571 662 aaKnown RBP eCLIP13.71□□□□□ -0.218e-17■■■■□ 25.6
CDK4-212ENST00000552388 ZNF263O14978 683 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 NCAM1P13591 858 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 COG7P83436 770 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 PFKPQ01813 784 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 GOLGA8FQ08AF8 430 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 GOLGA8DPQ0D2H9 430 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 TAF5Q15542 800 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 C2CD6Q53TS8 623 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 TDRD12Q587J7 1177 aaKnown RBP13.71□□□□□ -0.21
CDK4-212ENST00000552388 ACAD10Q6JQN1 1059 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 CC2D1AQ6P1N0 951 aaPredicted RBP13.71□□□□□ -0.21
CDK4-212ENST00000552388 MMS22LQ6ZRQ5 1243 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 MON1BQ7L1V2 547 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 OSCP1Q8WVF1 389 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 DNASE1L2Q92874 299 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 SLC2A13Q96QE2 648 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 FAM83CQ9BQN1 747 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 C11orf70Q9BRQ4 267 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 BRD9Q9H8M2 597 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 GKN1Q9NS71 199 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 ADAM22Q9P0K1 906 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 MARCH2Q9P0N8 246 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 CFAP97Q9P2B7 532 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 ARHGAP20Q9P2F6 1191 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 WDR35Q9P2L0 1181 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 RASAL2Q9UJF2 1139 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 STRIP2Q9ULQ0 834 aa13.71□□□□□ -0.21
CDK4-212ENST00000552388 NAALADL1Q9UQQ1 740 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms