RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 CA14Q9ULX7 337 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 HS3ST4Q9Y661 456 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 CDY1Q9Y6F8 540 aa6.05□□□□□ -1.44
CPSF6-206ENST00000550987 ZNF536O15090 1300 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 A0A0B4J269 797 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 NPIPB6E9PJ23 425 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 TOR1BO14657 336 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 DCLK1O15075 740 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 ZSCAN9O15535 394 aaPredicted RBP6.04□□□□□ -1.44
CPSF6-206ENST00000550987 NUAK1O60285 661 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 SRGAP2O75044 1071 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 MBD4O95243 580 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 VIPP01282 170 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 HSP90AA1P07900 732 aaKnown RBP6.04□□□□□ -1.44
CPSF6-206ENST00000550987 GCSHP23434 173 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 BDNFP23560 247 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 PRKAR1BP31321 381 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 KRT9P35527 623 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 SLFN5Q08AF3 891 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 TCF15Q12870 199 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 BOP1Q14137 746 aaKnown RBP6.04□□□□□ -1.44
CPSF6-206ENST00000550987 SIM2Q14190 667 aaPredicted RBP6.04□□□□□ -1.44
CPSF6-206ENST00000550987 RPS6KA2Q15349 733 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 ZNF750Q32MQ0 723 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 METTL24Q5JXM2 366 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 LIN54Q6MZP7 749 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 RETSATQ6NUM9 610 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 TAF2Q6P1X5 1199 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 TMEM108Q6UXF1 575 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 NRSN1Q8IZ57 195 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 ESX1Q8N693 406 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 TP53I13Q8NBR0 393 aaPredicted RBP6.04□□□□□ -1.44
CPSF6-206ENST00000550987 MDGA1Q8NFP4 955 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 OR52N2Q8NGI0 321 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 MAELQ96JY0 434 aaKnown RBP6.04□□□□□ -1.44
CPSF6-206ENST00000550987 TRAPPC9Q96Q05 1148 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 RBM15Q96T37 977 aaKnown RBP eCLIP6.04□□□□□ -1.445e-8■■■■■ 28.9
CPSF6-206ENST00000550987 RTKNQ9BST9 563 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 SLC46A2Q9BY10 475 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 RNF186Q9NXI6 227 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 ETAA1Q9NY74 926 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 SLC13A4Q9UKG4 626 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 SH3BP1Q9Y3L3 701 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 DTNAQ9Y4J8 743 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 GCN1Q92616 2671 aaKnown RBP6.04□□□□□ -1.44
CPSF6-206ENST00000550987 FAM208BQ5VWN6 2430 aa6.04□□□□□ -1.44
CPSF6-206ENST00000550987 CCDC141Q6ZP82 1450 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 TOGARAM1Q9Y4F4 1720 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 hCG_1984214I3L0E3 225 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 EYA2O00167 538 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 NOBOXO60393 691 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 SNX2O60749 519 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 TRIM13O60858 407 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 SOAT2O75908 522 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 RHOBTB3O94955 611 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 HLA-DOAP06340 250 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 CKMT1AP12532 417 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 RXRAP19793 462 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 CST5P28325 142 aaPredicted RBP6.03□□□□□ -1.44
CPSF6-206ENST00000550987 AKT1P31749 480 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 ELF1P32519 619 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 MSX2P35548 267 aaPredicted RBP6.03□□□□□ -1.44
CPSF6-206ENST00000550987 ADD2P35612 726 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 RAP1GAPP47736 663 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 DGKEP52429 567 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 LOXL3P58215 753 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 NHLH2Q02577 135 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 SCAPQ12770 1279 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 GPS1Q13098 491 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 CUL4BQ13620 913 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 E2F2Q14209 437 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 CSRP2Q16527 193 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 TRIM71Q2Q1W2 868 aaKnown RBP6.03□□□□□ -1.44
CPSF6-206ENST00000550987 PREPLQ4J6C6 727 aaPredicted RBP6.03□□□□□ -1.44
CPSF6-206ENST00000550987 FAAH2Q6GMR7 532 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 RINT1Q6NUQ1 792 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 SGMS1Q86VZ5 419 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 SLC44A2Q8IWA5 706 aaPredicted RBP6.03□□□□□ -1.44
CPSF6-206ENST00000550987 ZFPM1Q8IX07 1006 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 SLC30A5Q8TAD4 765 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 SPPL3Q8TCT6 385 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 ABHD5Q8WTS1 349 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 WDR60Q8WVS4 1066 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 GNRHR2Q96P88 292 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 PTDSS2Q9BVG9 487 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 PABPC3Q9H361 631 aaKnown RBP6.03□□□□□ -1.44
CPSF6-206ENST00000550987 UNC45AQ9H3U1 944 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 RNPEPQ9H4A4 650 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 CD320Q9NPF0 282 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 IRAK4Q9NWZ3 460 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 GJD2Q9UKL4 321 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 MRPS17Q9Y2R5 130 aaKnown RBP6.03□□□□□ -1.44
CPSF6-206ENST00000550987 USP15Q9Y4E8 981 aaPredicted RBP6.03□□□□□ -1.44
CPSF6-206ENST00000550987 C5P01031 1676 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 DICER1Q9UPY3 1922 aaKnown RBP6.03□□□□□ -1.44
CPSF6-206ENST00000550987 RGPD8O14715 1765 aaPredicted RBP6.03□□□□□ -1.44
CPSF6-206ENST00000550987 REV3LO60673 3130 aa6.03□□□□□ -1.44
CPSF6-206ENST00000550987 F5H697 171 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 NTSR2O95665 410 aa6.02□□□□□ -1.45
CPSF6-206ENST00000550987 GPANK1O95872 356 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms