RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 TEPSINQ96N21 525 aa12.05□□□□□ -0.48
LGR5-206ENST00000550851 GPR63Q9BZJ6 419 aa12.05□□□□□ -0.48
LGR5-206ENST00000550851 CTNNAL1Q9UBT7 734 aa12.05□□□□□ -0.48
LGR5-206ENST00000550851 C2CD2Q9Y426 696 aa12.05□□□□□ -0.48
LGR5-206ENST00000550851 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.05□□□□□ -0.48
LGR5-206ENST00000550851 SMAPO00193 183 aa12.05□□□□□ -0.48
LGR5-206ENST00000550851 SLC2A3P11169 496 aa12.05□□□□□ -0.48
LGR5-206ENST00000550851 YBX3P16989 372 aaKnown RBP eCLIP12.05□□□□□ -0.48
LGR5-206ENST00000550851 NFKBIAP25963 317 aa12.05□□□□□ -0.48
LGR5-206ENST00000550851 SOX11P35716 441 aa12.05□□□□□ -0.48
LGR5-206ENST00000550851 MRPS6P82932 125 aaKnown RBP12.05□□□□□ -0.48
LGR5-206ENST00000550851 KRT33BQ14525 404 aa12.05□□□□□ -0.48
LGR5-206ENST00000550851 SKIV2LQ15477 1246 aaKnown RBP12.05□□□□□ -0.48
LGR5-206ENST00000550851 KDM7AQ6ZMT4 941 aa12.05□□□□□ -0.48
LGR5-206ENST00000550851 TRPM8Q7Z2W7 1104 aa12.05□□□□□ -0.48
LGR5-206ENST00000550851 SPDL1Q96EA4 605 aa12.05□□□□□ -0.48
LGR5-206ENST00000550851 CPXM1Q96SM3 734 aa12.05□□□□□ -0.48
LGR5-206ENST00000550851 MRPL45Q9BRJ2 306 aaKnown RBP12.05□□□□□ -0.48
LGR5-206ENST00000550851 NIFKQ9BYG3 293 aaKnown RBP12.05□□□□□ -0.48
LGR5-206ENST00000550851 TKTL2Q9H0I9 626 aa12.05□□□□□ -0.48
LGR5-206ENST00000550851 DMAC2Q9NW81 257 aa12.05□□□□□ -0.48
LGR5-206ENST00000550851 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.05□□□□□ -0.48
LGR5-206ENST00000550851 DSEQ9UL01 958 aa12.05□□□□□ -0.48
LGR5-206ENST00000550851 ADGRA3Q8IWK6 1321 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 F5H5T6 163 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 CBX4O00257 560 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 C4BPAP04003 597 aaKnown RBP12.04□□□□□ -0.48
LGR5-206ENST00000550851 ATXN3P54252 364 aaPredicted RBP12.04□□□□□ -0.48
LGR5-206ENST00000550851 TTC39BQ5VTQ0 682 aaPredicted RBP12.04□□□□□ -0.48
LGR5-206ENST00000550851 KATNAL2Q8IYT4 538 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 BRI3BPQ8WY22 251 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 E2F7Q96AV8 911 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 DDX50Q9BQ39 737 aaKnown RBP12.04□□□□□ -0.48
LGR5-206ENST00000550851 TRPM5Q9NZQ8 1165 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 GRID1Q9ULK0 1009 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 COG5Q9UP83 839 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 USH1CQ9Y6N9 552 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 MYH13Q9UKX3 1938 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 TCRBV7S2A1N4TA0A589 114 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 ANXA9O76027 345 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 LRG1P02750 347 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 AKT1P31749 480 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 FDFT1P37268 417 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 TUBP50607 506 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 FKBP1BP68106 108 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 CRADDP78560 199 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 TBCBQ99426 244 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 SNRNP25Q9BV90 132 aaKnown RBP12.04□□□□□ -0.48
LGR5-206ENST00000550851 EIF2AQ9BY44 585 aaKnown RBP12.04□□□□□ -0.48
LGR5-206ENST00000550851 MANSC1Q9H8J5 431 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 ERVK-5Q9HDB9 667 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 GDF3Q9NR23 364 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 FAM105AQ9NUU6 356 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 VANGL2Q9ULK5 521 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 SMIM28A0A1B0GU29 152 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 STK25O00506 426 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 URODP06132 367 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 PYGBP11216 843 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 DARSP14868 501 aaKnown RBP12.04□□□□□ -0.48
LGR5-206ENST00000550851 CHRM3P20309 590 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 ICAM3P32942 547 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 HADHAP40939 763 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 ABCG1P45844 678 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 RAB27AP51159 221 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 BTG3Q14201 252 aaPredicted RBP12.04□□□□□ -0.48
LGR5-206ENST00000550851 ZRANB3Q5FWF4 1079 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 HTR3CQ8WXA8 447 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 NDRG1Q92597 394 aaKnown RBP12.04□□□□□ -0.48
LGR5-206ENST00000550851 OLA1Q9NTK5 396 aaKnown RBP12.04□□□□□ -0.48
LGR5-206ENST00000550851 NINJ2Q9NZG7 142 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 PCDHB5Q9Y5E4 795 aa12.04□□□□□ -0.48
LGR5-206ENST00000550851 APOC4-APOC2K7ER74 178 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 RNF103O00237 685 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 GNGT2O14610 69 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 APOC2P02655 101 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 NPR3P17342 541 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 SCNN1BP51168 640 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 TMEM192Q8IY95 271 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 DTX3LQ8TDB6 740 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 DDI1Q8WTU0 396 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 IARS2Q9NSE4 1012 aaKnown RBP12.03□□□□□ -0.48
LGR5-206ENST00000550851 SHOC2Q9UQ13 582 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 NUP98P52948 1817 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 BANF1O75531 89 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 SHBGP04278 402 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 MMP8P22894 467 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 RPL10AP62906 217 aaKnown RBP12.03□□□□□ -0.48
LGR5-206ENST00000550851 NOGQ13253 232 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 CUL3Q13618 768 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 IMPG1Q17R60 797 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 THEMIS2Q5TEJ8 643 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 PDZD8Q8NEN9 1154 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 GPR152Q8TDT2 470 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 FICDQ9BVA6 458 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 FRMD8Q9BZ67 464 aaPredicted RBP12.03□□□□□ -0.48
LGR5-206ENST00000550851 MTIF3Q9H2K0 278 aaKnown RBP12.03□□□□□ -0.48
LGR5-206ENST00000550851 POPDC2Q9HBU9 364 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 APOBEC3GQ9HC16 384 aaKnown RBP12.03□□□□□ -0.48
LGR5-206ENST00000550851 PCDHA2Q9Y5H9 948 aa12.03□□□□□ -0.48
LGR5-206ENST00000550851 ALS2Q96Q42 1657 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms