RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 SSX2IPQ9Y2D8 614 aa4.79□□□□□ -1.64
SNRPF-202ENST00000549580 FAM90A18PA6NE21 464 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 FAM90A16PA6NEW6 464 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 MARCH11A6NNE9 402 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 FAM90A9PA6NNJ1 464 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 FAM90A5PA8MXJ8 464 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 H0Y3Z8 333 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 HOXC11O43248 304 aaPredicted RBP4.78□□□□□ -1.64
SNRPF-202ENST00000549580 ZFPL1O95159 310 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 TK1P04183 234 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 CFIP05156 583 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 PRKCBP05771 671 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 POLBP06746 335 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 FAM90A15PP0C7V4 464 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 FAM90A14PP0C7W9 464 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 HGFP14210 728 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 TNFAIP3P21580 790 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 KLRK1P26718 216 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 UQCRC1P31930 480 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 NDUFV1P49821 464 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 CDK7P50613 346 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 PAPOLAP51003 745 aaKnown RBP4.78□□□□□ -1.64
SNRPF-202ENST00000549580 PRKAG1P54619 331 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 ACTR2P61160 394 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 RPS7P62081 194 aaKnown RBP4.78□□□□□ -1.64
SNRPF-202ENST00000549580 FOXF2Q12947 444 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 HYIQ5T013 277 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 CERCAMQ5T4B2 595 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 TTC22Q5TAA0 569 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 ARHGAP40Q5TG30 622 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 ANKRD45Q5TZF3 282 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 WDR78Q5VTH9 848 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 B3GNTL1Q67FW5 361 aaPredicted RBP4.78□□□□□ -1.64
SNRPF-202ENST00000549580 RGS7BPQ6MZT1 257 aaPredicted RBP4.78□□□□□ -1.64
SNRPF-202ENST00000549580 GDF7Q7Z4P5 450 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 C2CD5Q86YS7 1000 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 SLC15A3Q8IY34 581 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 ADGRG5Q8IZF4 528 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 NME8Q8N427 588 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 OR6Y1Q8NGX8 325 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 ABHD5Q8WTS1 349 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 GRAMD1AQ96CP6 724 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 WDR24Q96S15 920 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 SEC62Q99442 399 aaKnown RBP4.78□□□□□ -1.64
SNRPF-202ENST00000549580 ZCWPW1Q9H0M4 648 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 UBN1Q9NPG3 1134 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 FSCN3Q9NQT6 498 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 RASSF1Q9NS23 344 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 RNF181Q9P0P0 153 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 COL15A1P39059 1388 aa4.78□□□□□ -1.64
SNRPF-202ENST00000549580 DNAJC9-AS1A6NH13 148 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 J3KTA2 159 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 AGPSO00116 658 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 TOR1BO14657 336 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 CBFA2T3O75081 653 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 TAF5LO75529 589 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 JUPP14923 745 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 CNTFP26441 200 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 CD6P30203 668 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 CASP2P42575 452 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 NPTX2P47972 431 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 RXRGP48443 463 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 PDE6CP51160 858 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 PGDP52209 483 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 TP53BP2Q13625 1128 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 GRM4Q14833 912 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 RBM20Q5T481 1227 aaKnown RBP4.77□□□□□ -1.65
SNRPF-202ENST00000549580 VPS53Q5VIR6 699 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 ICE2Q659A1 982 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 NFRKBQ6P4R8 1299 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 RAB11FIP2Q7L804 512 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 MAATS1Q7Z4T9 603 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 ANKS1BQ7Z6G8 1248 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 TMEM132CQ8N3T6 1108 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 ESX1Q8N693 406 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 Q8N9P0 234 aaPredicted RBP4.77□□□□□ -1.65
SNRPF-202ENST00000549580 CPEB3Q8NE35 698 aaKnown RBP4.77□□□□□ -1.65
SNRPF-202ENST00000549580 AFG1LQ8WV93 481 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 ASB10Q8WXI3 467 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 NACC2Q96BF6 587 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 BOD1Q96IK1 185 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 MAELQ96JY0 434 aaKnown RBP4.77□□□□□ -1.65
SNRPF-202ENST00000549580 TRAPPC9Q96Q05 1148 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 HIST1H2AAQ96QV6 131 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 VPS16Q9H269 839 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 TAF1DQ9H5J8 278 aaPredicted RBP4.77□□□□□ -1.65
SNRPF-202ENST00000549580 SEPSECSQ9HD40 501 aaKnown RBP4.77□□□□□ -1.65
SNRPF-202ENST00000549580 G6PC2Q9NQR9 355 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 TMEM160Q9NX00 188 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 MAP3K2Q9Y2U5 619 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 FPGT-TNNI3KV9GXZ4 949 aa4.77□□□□□ -1.65
SNRPF-202ENST00000549580 PNMA6EA0A0J9YXQ4 647 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 F5H697 171 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 RNASET2O00584 256 aaKnown RBP4.76□□□□□ -1.65
SNRPF-202ENST00000549580 IKBKBO14920 756 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 TRIAP1O43715 76 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 ERN1O75460 977 aaKnown RBP4.76□□□□□ -1.65
SNRPF-202ENST00000549580 RBL1P28749 1068 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 EPHA3P29320 983 aa4.76□□□□□ -1.65
SNRPF-202ENST00000549580 NTSR1P30989 418 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms