RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 RTN3O95197 1032 aaPredicted RBP11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 TNNC2P02585 160 aa11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 CISD3P0C7P0 127 aa11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 GARTP22102 1010 aa11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 OXTRP30559 389 aa11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 EIF2S3P41091 472 aaKnown RBP11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 SEMG2Q02383 582 aa11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 PTPRNQ16849 979 aa11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 KIF19Q2TAC6 998 aa11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 L1TD1Q5T7N2 865 aaKnown RBP11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 SNX30Q5VWJ9 437 aa11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 HTR3DQ70Z44 454 aa11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 TMPRSS6Q8IU80 811 aa11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 LSM14AQ8ND56 463 aaKnown RBP11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 BHMTQ93088 406 aa11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 FCRL3Q96P31 734 aaPredicted RBP11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 DUSP9Q99956 384 aaKnown RBP11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 B3GNT5Q9BYG0 378 aa11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 GMIPQ9P107 970 aa11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 HELZ2Q9BYK8 2649 aaKnown RBP11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 TENM4Q6N022 2769 aa11.44□□□□□ -0.58
TRAFD1-206ENST00000549358 E9PAM4 449 aa11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 CAPN9O14815 690 aa11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 RRP8O43159 456 aaKnown RBP11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 GREM1O60565 184 aa11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 GCNT3O95395 438 aa11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 CST3P01034 146 aaPredicted RBP11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 GRK6P43250 576 aa11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 TUBP50607 506 aa11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 AFF3P51826 1226 aaKnown RBP11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 CASP5P51878 434 aa11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 GRIN1Q05586 938 aa11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 SF3A1Q15459 793 aaKnown RBP11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 DUOXA2Q1HG44 320 aa11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 FAM124AQ86V42 546 aa11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 GPD1LQ8N335 351 aa11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 C1orf216Q8TAB5 229 aa11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 PRCCQ92733 491 aaPredicted RBP11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 SIPA1Q96FS4 1042 aa11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 ZSCAN31Q96LW9 406 aaPredicted RBP11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 NUP58Q9BVL2 599 aa11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 PLK2Q9NYY3 685 aa11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 SLCO1B1Q9Y6L6 691 aa11.43□□□□□ -0.58
TRAFD1-206ENST00000549358 A8MXQ7 604 aa11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 J3QKU1 62 aa11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 TLX3O43711 291 aaPredicted RBP11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 SYNCRIPO60506 623 aaKnown RBP11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 TACC1O75410 805 aa11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 PRPF6O94906 941 aaKnown RBP11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 TBX18O95935 607 aa11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 ACADMP11310 421 aa11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 JUPP14923 745 aa11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 IL12RB1P42701 662 aa11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 PGFP49763 221 aa11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 CFHR1Q03591 330 aa11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 C6orf118Q5T5N4 469 aa11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 TMPRSS12Q86WS5 348 aa11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 CACUL1Q86Y37 369 aa11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 B3GALNT2Q8NCR0 500 aa11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 ENGASEQ8NFI3 743 aa11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 SNX19Q92543 992 aa11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 NXPE2Q96DL1 559 aa11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 KLF16Q9BXK1 252 aaPredicted RBP11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.42□□□□□ -0.582e-6■■■■■ 41.9
TRAFD1-206ENST00000549358 MARK1Q9P0L2 795 aa11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 SEL1LQ9UBV2 794 aa11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 ANKRD6Q9Y2G4 727 aa11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 AK5Q9Y6K8 562 aa11.42□□□□□ -0.58
TRAFD1-206ENST00000549358 GON4LQ3T8J9 2241 aa11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 MYOFQ9NZM1 2061 aa11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 ZNF233A6NK53 670 aa11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 TLR5O60602 858 aa11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 ZDHHC11BP0C7U3 371 aa11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 GAP43P17677 238 aa11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 LONP1P36776 959 aaKnown RBP11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 ZNF132P52740 706 aa11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 SLC5A3P53794 718 aa11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 CLDN6P56747 220 aa11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 IL9RQ01113 521 aa11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 TEAD4Q15561 434 aa11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 WDR72Q3MJ13 1102 aa11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 TRAPPC11Q7Z392 1133 aa11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 GPR155Q7Z3F1 870 aa11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 CBWD2Q8IUF1 395 aa11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 MED10Q9BTT4 135 aa11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 FGFBP2Q9BYJ0 223 aa11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 C6orf106Q9H6K1 298 aaPredicted RBP11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 IL37Q9NZH6 218 aa11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 FTSJ1Q9UET6 329 aa11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 LSM7Q9UK45 103 aaKnown RBP11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 BOLA1Q9Y3E2 137 aa11.41□□□□□ -0.58
TRAFD1-206ENST00000549358 H0Y8X5 98 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 PCDHGA12O60330 932 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 IGLV3-19P01714 112 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 FAM163BP0C2L3 166 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 ACO1P21399 889 aaKnown RBP11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 HNF1BP35680 557 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 ATP5C1P36542 298 aaKnown RBP11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 CCT8P50990 548 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 COPAP53621 1224 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms