RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 DNMT3BQ9UBC3 853 aaKnown RBP10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 MYO1AQ9UBC5 1043 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 ANAPC7Q9UJX3 599 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 TMEM59LQ9UK28 342 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 LSM7Q9UK45 103 aaKnown RBP10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 USTQ9Y2C2 406 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 ZNF510Q9Y2H8 683 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 NR2E1Q9Y466 385 aa10.21□□□□□ -0.77
SMARCD1-206ENST00000549274 DENND4AQ7Z401 1863 aa10.21□□□□□ -0.78
SMARCD1-206ENST00000549274 HELZP42694 1942 aaKnown RBP10.21□□□□□ -0.78
SMARCD1-206ENST00000549274 A0A1W2PQH9 124 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 ZNF263O14978 683 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 LINC01565O15544 149 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 LATS1O95835 1130 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 OAS1P00973 400 aaKnown RBP10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 CKMP06732 381 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 GTF2F1P35269 517 aaKnown RBP eCLIP10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 NOP2P46087 812 aaKnown RBP10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 ZNF135P52742 658 aaPredicted RBP10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 NAP1L1P55209 391 aaKnown RBP10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 USP46P62068 366 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 RING1Q06587 406 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 MTMR3Q13615 1198 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 CBX2Q14781 532 aaPredicted RBP10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 MTF1Q14872 753 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 HADHQ16836 314 aaKnown RBP10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 ARL13BQ3SXY8 428 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 DCAF6Q58WW2 860 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 BRMS1LQ5PSV4 323 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 C10orf120Q5SQS8 335 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 PPP1R15BQ5SWA1 713 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 NUGGCQ68CJ6 796 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 OTOP3Q7RTS5 596 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 UNC45BQ8IWX7 931 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 NIPA2Q8N8Q9 360 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 SLC35G2Q8TBE7 412 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 NXPE3Q969Y0 559 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 PLD4Q96BZ4 506 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 DDX50Q9BQ39 737 aaKnown RBP10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 DDX23Q9BUQ8 820 aaKnown RBP10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 IRX2Q9BZI1 471 aaPredicted RBP10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 S1PR5Q9H228 398 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 KDM4CQ9H3R0 1056 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 FAM204AQ9H8W3 233 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 IL21Q9HBE4 155 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 ZNF334Q9HCZ1 680 aaPredicted RBP10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 OBP2AQ9NY56 170 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 CLEC1BQ9P126 229 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 CHORDC1Q9UHD1 332 aaPredicted RBP10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 PPP2R2CQ9Y2T4 447 aa10.2□□□□□ -0.78
SMARCD1-206ENST00000549274 A0A1W2PRU2 124 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 TCRBV5S1A1TA0A578 114 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 TMEM191CA6NGB0 347 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 C2CD4BA6NLJ0 364 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 PIK3R2O00459 728 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 OLFM2O95897 454 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 APOEP02649 317 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 TCF3P15923 654 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 HDCP19113 662 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 PSMA2P25787 234 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 RDXP35241 583 aaKnown RBP10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 PCK1P35558 622 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 RNASE9P60153 205 aaKnown RBP10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 SLC7A9P82251 487 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 LEXMQ3ZCV2 418 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 PRSS36Q5K4E3 855 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 GPR158Q5T848 1215 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 GAREM2Q75VX8 874 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 MTSS1LQ765P7 747 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 BHLHA9Q7RTU4 235 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 SCD5Q86SK9 330 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 PSTKQ8IV42 348 aaKnown RBP10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 DEFB106AQ8N104 65 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 ATP6V0D2Q8N8Y2 350 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 ACRBPQ8NEB7 543 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 TRIM58Q8NG06 486 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 MAFAQ8NHW3 353 aaPredicted RBP10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 SHKBP1Q8TBC3 707 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 RXFP2Q8WXD0 754 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 SUSD6Q92537 303 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 NT5C3BQ969T7 300 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 TRPC7Q9HCX4 862 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 KCND1Q9NSA2 647 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 DDIT4Q9NX09 232 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 DONSONQ9NYP3 566 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 MARCH2Q9P0N8 246 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 CDH7Q9ULB5 785 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 ARHGAP26Q9UNA1 814 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 TLR6Q9Y2C9 796 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 NOTCH4Q99466 2003 aa10.19□□□□□ -0.78
SMARCD1-206ENST00000549274 DOCK6Q96HP0 2047 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 SLC9A3R1O14745 358 aaPredicted RBP10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 IRAK2O43187 625 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 KIF5CO60282 957 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 TADA3O75528 432 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 TRUB2O95900 331 aaKnown RBP10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 TUBB4AP04350 444 aa10.18□□□□□ -0.78
SMARCD1-206ENST00000549274 MBL2P11226 248 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms