RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 MATKP42679 507 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 PTPN9P43378 593 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 ATXN1P54253 815 aaKnown RBP8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 HDAC4P56524 1084 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 ATP11AP98196 1134 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 IFRD2Q12894 506 aaPredicted RBP8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 ZNF211Q13398 564 aaPredicted RBP8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 MTMR3Q13615 1198 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 CAMK1Q14012 370 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 CDO1Q16878 200 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 ATP13A4Q4VNC1 1196 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 SYPL2Q5VXT5 272 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 PLPP4Q5VZY2 271 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 CC2D1AQ6P1N0 951 aaPredicted RBP8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 BNIPLQ7Z465 357 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 ANKS1BQ7Z6G8 1248 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 SCD5Q86SK9 330 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 RETREG3Q86VR2 466 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 DEFB106AQ8N104 65 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 NUP93Q8N1F7 819 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 RASGEF1CQ8N431 466 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 ZNF461Q8TAF7 563 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 IRGQQ8WZA9 623 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 FAM149B1Q96BN6 582 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 MS4A14Q96JA4 679 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 CAPZA3Q96KX2 299 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 SPATA17Q96L03 361 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 FAM161BQ96MY7 647 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 KLHL5Q96PQ7 755 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 TBCBQ99426 244 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 NPY6RQ99463 290 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 SEPT5Q99719 369 aaPredicted RBP8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 CARD6Q9BX69 1037 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 PLVAPQ9BX97 442 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 NMUR1Q9HB89 426 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 MRPL17Q9NRX2 175 aaKnown RBP8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 OSER1Q9NX31 292 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 LCMT1Q9UIC8 334 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 NAALADL1Q9UQQ1 740 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 RWDD3Q9Y3V2 267 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 YIPF1Q9Y548 306 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 PCDHA11Q9Y5I1 949 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 A0A0C4DFX4 3053 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 SZT2Q5T011 3432 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 NOTCH4Q99466 2003 aa8.46□□□□□ -1.06
DEPDC4-207ENST00000549249 TMEM265A0A087WTH1 108 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 FAM92AA1XBS5 289 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 C2orf71A6NGG8 1288 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 SLC38A8A6NNN8 435 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 HIDE1A8MVS5 230 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 CES2O00748 559 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 SART1O43290 800 aaKnown RBP8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 DXOO77932 396 aaKnown RBP8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 CXCL14O95715 111 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 PYGMP11217 842 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 MIPP30301 263 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 SDC4P31431 198 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 NOS2P35228 1153 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 PCK1P35558 622 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 IRS1P35568 1242 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 MMP16P51512 607 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 ERVK-21P61565 698 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 RPL10AP62906 217 aaKnown RBP8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 YWHAZP63104 245 aaKnown RBP8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 TUBB2AQ13885 445 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 ACAP1Q15027 740 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 WHAMMP3Q1A5X7 153 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 DCAF6Q58WW2 860 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 LRRC38Q5VT99 294 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 BSPRYQ5W0U4 402 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 TPGS2Q68CL5 300 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 ZNF572Q7Z3I7 529 aaPredicted RBP8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 TMC7Q7Z402 723 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 RHOT1Q8IXI2 618 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 UBL4BQ8N7F7 174 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 GIPC2Q8TF65 315 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 FAM172AQ8WUF8 416 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 CENPIQ92674 756 aaPredicted RBP8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 NT5C3BQ969T7 300 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 PBKQ96KB5 322 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 GUCD1Q96NT3 240 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 TGS1Q96RS0 853 aaKnown RBP8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 CDX2Q99626 313 aaPredicted RBP8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 TCF25Q9BQ70 676 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 HERPUD2Q9BSE4 406 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 TUBB2BQ9BVA1 445 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 TTLL2Q9BWV7 592 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 PBX4Q9BYU1 374 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 CARD9Q9H257 536 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 NKX2-4Q9H2Z4 354 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 POPDC2Q9HBU9 364 aa8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 NGRNQ9NPE2 291 aaKnown RBP8.45□□□□□ -1.06
DEPDC4-207ENST00000549249 KLHL11Q9NVR0 708 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms