RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 SHROOM1Q2M3G4 852 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-225ENST00000545920 WDR72Q3MJ13 1102 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 SUPT20HL1Q3ZLR7 823 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 ZFYVE27Q5T4F4 411 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 MAP3K21Q5TCX8 1036 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 ANGEL2Q5VTE6 544 aaKnown RBP6.73□□□□□ -1.33
SNHG1-225ENST00000545920 ANO7Q6IWH7 933 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 SLC30A9Q6PML9 568 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 TIFABQ6ZNK6 161 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 ILDR2Q71H61 639 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 SLC26A11Q86WA9 606 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 CPNE8Q86YQ8 564 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 CCNJLQ8IV13 435 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 MAP7D3Q8IWC1 876 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 ZNF276Q8N554 614 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 DNERQ8NFT8 737 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 CMASQ8NFW8 434 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-225ENST00000545920 IL31RAQ8NI17 732 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 ZNF483Q8TF39 744 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-225ENST00000545920 SLC7A3Q8WY07 619 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 BSNDQ8WZ55 320 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 CPT1BQ92523 772 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 JADE3Q92613 823 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 FAM136AQ96C01 138 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 ARMC5Q96C12 935 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 ZBED3Q96IU2 234 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-225ENST00000545920 C12orf42Q96LP6 360 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 TBCBQ99426 244 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 TSC22D3Q99576 134 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 MSTO1Q9BUK6 570 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 MAK16Q9BXY0 300 aaKnown RBP6.73□□□□□ -1.33
SNHG1-225ENST00000545920 CCSER2Q9H7U1 834 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 CYP3A43Q9HB55 503 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 AS3MTQ9HBK9 375 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 GPRC5CQ9NQ84 441 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 XPNPEP1Q9NQW7 623 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 TOPORSQ9NS56 1045 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-225ENST00000545920 NRBP2Q9NSY0 501 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 ASNSD1Q9NWL6 643 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 CNTN3Q9P232 1028 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 GABBR1Q9UBS5 961 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 CHORDC1Q9UHD1 332 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-225ENST00000545920 SLC4A7Q9Y6M7 1214 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 MYH11P35749 1972 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 CNTNAP2Q9UHC6 1331 aa6.73□□□□□ -1.33
SNHG1-225ENST00000545920 ZNF646O15015 1829 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-225ENST00000545920 ENO4A6NNW6 628 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 A8MUI8 341 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 SPECC1L-ADORA2AF8WAN1 911 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 COPEO14579 308 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 OGTO15294 1046 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 SPINT1O43278 529 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 ADCY3O60266 1144 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 ZNF862O60290 1169 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 B4GALT4O60513 344 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 TOM1L1O75674 476 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 RNF8O76064 485 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 ENDOD1O94919 500 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 KLHL2O95198 593 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 PSMG1O95456 288 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 MMP10P09238 476 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 DLDP09622 509 aaKnown RBP6.72□□□□□ -1.33
SNHG1-225ENST00000545920 PIM1P11309 404 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-225ENST00000545920 KRT3P12035 628 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 P4HA1P13674 534 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 CCDC130P13994 396 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 ZFXP17010 805 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-225ENST00000545920 EIF2AK2P19525 551 aaKnown RBP6.72□□□□□ -1.33
SNHG1-225ENST00000545920 TGM2P21980 687 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 PRKCHP24723 683 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 PSMA2P25787 234 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 EPHB2P29323 1055 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 PRDX6P30041 224 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 ATICP31939 592 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 TGFB2P61812 414 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 SARNPP82979 210 aaKnown RBP6.72□□□□□ -1.33
SNHG1-225ENST00000545920 MXRA7P84157 204 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 ROR1Q01973 937 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 SLC25A11Q02978 314 aaKnown RBP6.72□□□□□ -1.33
SNHG1-225ENST00000545920 MXD4Q14582 209 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-225ENST00000545920 SNX30Q5VWJ9 437 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 FAM160B1Q5W0V3 765 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 AP1ARQ63HQ0 302 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 PDE12Q6L8Q7 609 aaKnown RBP6.72□□□□□ -1.33
SNHG1-225ENST00000545920 LRRC74BQ6ZQY2 392 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 SH2D5Q6ZV89 423 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 MTDHQ86UE4 582 aaKnown RBP6.72□□□□□ -1.33
SNHG1-225ENST00000545920 LRRC6Q86X45 466 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 RHPN2Q8IUC4 686 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 TMEM126BQ8IUX1 230 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 GALNT15Q8N3T1 639 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 FBXO36Q8NEA4 188 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 TTC16Q8NEE8 873 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 ZSWIM2Q8NEG5 633 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 ACTL9Q8TC94 416 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 TCP10LQ8TDR4 215 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 TEKT4Q8WW24 435 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 OXNAD1Q96HP4 312 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-225ENST00000545920 OLFM3Q96PB7 478 aa6.72□□□□□ -1.33
SNHG1-225ENST00000545920 MCEEQ96PE7 176 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms