RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 CBFA2T2O43439 604 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 OAS1P00973 400 aaKnown RBP13.15□□□□□ -0.3
ACTN1-206ENST00000544964 CALCAP01258 141 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 CYP17A1P05093 508 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 PNMA6AP0CW24 399 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-206ENST00000544964 KRT5P13647 590 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 PFKLP17858 780 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 ANXA13P27216 316 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 GRIK1P39086 918 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 USP8P40818 1118 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 LIMK1P53667 647 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 RAD23BP54727 409 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 POLR2FP61218 127 aaKnown RBP13.15□□□□□ -0.3
ACTN1-206ENST00000544964 SLC7A9P82251 487 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 MESP2Q0VG99 397 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 DMC1Q14565 340 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 PLK5Q496M5 336 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 PPM1JQ5JR12 505 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 SARM1Q6SZW1 724 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 ENOSF1Q7L5Y1 443 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 ZC3H10Q96K80 434 aaKnown RBP13.15□□□□□ -0.3
ACTN1-206ENST00000544964 TNIP3Q96KP6 325 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 NT5C1AQ9BXI3 368 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 NAA15Q9BXJ9 866 aaKnown RBP13.15□□□□□ -0.3
ACTN1-206ENST00000544964 TRIM5Q9C035 493 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 RNF38Q9H0F5 515 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 SMOC1Q9H4F8 434 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 NLRC4Q9NPP4 1024 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 FAM49BQ9NUQ9 324 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 ZFHX4Q86UP3 3567 aa13.15□□□□□ -0.3
ACTN1-206ENST00000544964 CFAP47Q6ZTR5 3102 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 IGF2RP11717 2491 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 CLDN5O00501 218 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 SCAMP3O14828 347 aaKnown RBP13.14□□□□□ -0.31
ACTN1-206ENST00000544964 FOXD2O60548 495 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-206ENST00000544964 NFATC1O95644 943 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 APBB3O95704 486 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 TPM3P06753 285 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 ZNF806P0C7X5 589 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 PBX1P40424 430 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 PDE6CP51160 858 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 DRAP1Q14919 205 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-206ENST00000544964 SFTPA1Q8IWL2 248 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 CRYBG2Q8N1P7 616 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 TTC39CQ8N584 583 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 C12orf29Q8N999 325 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 SLC4A11Q8NBS3 891 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 RBBP8NLQ8NC74 664 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-206ENST00000544964 B3GALNT2Q8NCR0 500 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 ACDQ96AP0 544 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 TMEM176AQ96HP8 235 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 ZFRQ96KR1 1074 aaKnown RBP13.14□□□□□ -0.31
ACTN1-206ENST00000544964 FAM81BQ96LP2 452 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 HEXIM2Q96MH2 286 aaKnown RBP13.14□□□□□ -0.31
ACTN1-206ENST00000544964 TRPM5Q9NZQ8 1165 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 EBF1Q9UH73 591 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 PCDHGA5Q9Y5G8 931 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 CPQQ9Y646 472 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 CHD6Q8TD26 2715 aa13.14□□□□□ -0.31
ACTN1-206ENST00000544964 K7EQS6 105 aa13.13□□□□□ -0.31
ACTN1-206ENST00000544964 FOXN3O00409 490 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-206ENST00000544964 TM4SF5O14894 197 aa13.13□□□□□ -0.31
ACTN1-206ENST00000544964 DCLK1O15075 740 aa13.13□□□□□ -0.31
ACTN1-206ENST00000544964 CCDC130P13994 396 aa13.13□□□□□ -0.31
ACTN1-206ENST00000544964 CD19P15391 556 aa13.13□□□□□ -0.31
ACTN1-206ENST00000544964 TRIM21P19474 475 aaKnown RBP13.13□□□□□ -0.31
ACTN1-206ENST00000544964 MPLP40238 635 aa13.13□□□□□ -0.31
ACTN1-206ENST00000544964 TAF10Q12962 218 aa13.13□□□□□ -0.31
ACTN1-206ENST00000544964 AASDHQ4L235 1098 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-206ENST00000544964 TCEAL6Q6IPX3 200 aa13.13□□□□□ -0.31
ACTN1-206ENST00000544964 KIAA1958Q8N8K9 716 aa13.13□□□□□ -0.31
ACTN1-206ENST00000544964 USP33Q8TEY7 942 aa13.13□□□□□ -0.31
ACTN1-206ENST00000544964 SHC3Q92529 594 aa13.13□□□□□ -0.31
ACTN1-206ENST00000544964 TCEAL3Q969E4 200 aa13.13□□□□□ -0.31
ACTN1-206ENST00000544964 JAKMIP2Q96AA8 810 aa13.13□□□□□ -0.31
ACTN1-206ENST00000544964 MED10Q9BTT4 135 aa13.13□□□□□ -0.31
ACTN1-206ENST00000544964 B3GNT5Q9BYG0 378 aa13.13□□□□□ -0.31
ACTN1-206ENST00000544964 STK33Q9BYT3 514 aa13.13□□□□□ -0.31
ACTN1-206ENST00000544964 DUSP15Q9H1R2 295 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-206ENST00000544964 FAM124BQ9H5Z6 455 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-206ENST00000544964 SMPD4Q9NXE4 827 aa13.13□□□□□ -0.31
ACTN1-206ENST00000544964 PI4KAP42356 2102 aa13.12□□□□□ -0.31
ACTN1-206ENST00000544964 F8VZ95 297 aa13.12□□□□□ -0.31
ACTN1-206ENST00000544964 CYP26A1O43174 497 aa13.12□□□□□ -0.31
ACTN1-206ENST00000544964 HNRNPLP14866 589 aaKnown RBP eCLIP13.12□□□□□ -0.31
ACTN1-206ENST00000544964 ADORA2BP29275 332 aa13.12□□□□□ -0.31
ACTN1-206ENST00000544964 PPP3CCP48454 512 aa13.12□□□□□ -0.31
ACTN1-206ENST00000544964 ZNF75DP51815 510 aa13.12□□□□□ -0.31
ACTN1-206ENST00000544964 ZNF132P52740 706 aa13.12□□□□□ -0.31
ACTN1-206ENST00000544964 SEC13P55735 322 aa13.12□□□□□ -0.31
ACTN1-206ENST00000544964 PAQR9Q6ZVX9 377 aa13.12□□□□□ -0.31
ACTN1-206ENST00000544964 FAM35AQ86V20 835 aa13.12□□□□□ -0.31
ACTN1-206ENST00000544964 RASSF3Q86WH2 238 aa13.12□□□□□ -0.31
ACTN1-206ENST00000544964 C12orf40Q86WS4 652 aa13.12□□□□□ -0.31
ACTN1-206ENST00000544964 C12orf50Q8NA57 414 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-206ENST00000544964 SLC2A14Q8TDB8 520 aa13.12□□□□□ -0.31
ACTN1-206ENST00000544964 EXOC4Q96A65 974 aa13.12□□□□□ -0.31
ACTN1-206ENST00000544964 SPAG5Q96R06 1193 aa13.12□□□□□ -0.31
ACTN1-206ENST00000544964 DNAI2Q9GZS0 605 aa13.12□□□□□ -0.31
ACTN1-206ENST00000544964 ACP6Q9NPH0 428 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms