RNA–Protein interactions for RNA: ENST00000544382.5

CLPB-213, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, human

TSL 5

Gene CLPB, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPB-213	ENST00000544382	LETM1	O95202	739 aa	Predicted RBP	13.24	□□□□□ -0.29
CLPB-213	ENST00000544382	OPRD1	P41143	372 aa		13.24	□□□□□ -0.29
CLPB-213	ENST00000544382	RGS7	P49802	495 aa		13.24	□□□□□ -0.29
CLPB-213	ENST00000544382	HSP90AA4P	Q58FG1	418 aa		13.24	□□□□□ -0.29
CLPB-213	ENST00000544382	ZBTB44	Q8NCP5	570 aa		13.24	□□□□□ -0.29
CLPB-213	ENST00000544382	RPLP0P6	Q8NHW5	317 aa		13.24	□□□□□ -0.29
CLPB-213	ENST00000544382	NELL1	Q92832	810 aa		13.24	□□□□□ -0.29
CLPB-213	ENST00000544382	PLD4	Q96BZ4	506 aa		13.24	□□□□□ -0.29
CLPB-213	ENST00000544382	XPO6	Q96QU8	1125 aa	Known RBP	13.24	□□□□□ -0.29
CLPB-213	ENST00000544382	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.24	□□□□□ -0.29
CLPB-213	ENST00000544382	ARHGEF4	Q9NR80	690 aa		13.24	□□□□□ -0.29
CLPB-213	ENST00000544382	ABCC13	Q9NSE7	274 aa		13.24	□□□□□ -0.29
CLPB-213	ENST00000544382	RAB23	Q9ULC3	237 aa		13.24	□□□□□ -0.29
CLPB-213	ENST00000544382	RIF1	Q5UIP0	2472 aa	Known RBP	13.24	□□□□□ -0.29
CLPB-213	ENST00000544382	PTPRZ1	P23471	2315 aa	Predicted RBP	13.24	□□□□□ -0.29
CLPB-213	ENST00000544382	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.24	□□□□□ -0.29
CLPB-213	ENST00000544382	KIAA1549L	Q6ZVL6	1849 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	SLC12A8	A0AV02	714 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	STC2	O76061	302 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	HMBS	P08397	361 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	CORO1A	P31146	461 aa	Known RBP	13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	HOXA6	P31267	233 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	CHKA	P35790	457 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	GRIA2	P42262	883 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	HARS2	P49590	506 aa	Known RBP	13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	DAOA	P59103	153 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	PTK2	Q05397	1052 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	BSPRY	Q5W0U4	402 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	NAIF1	Q69YI7	327 aa	Predicted RBP	13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	PMF1	Q6P1K2	205 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	GJB7	Q6PEY0	223 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	ASCL5	Q7RTU5	278 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	SHC3	Q92529	594 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	HINFP	Q9BQA5	517 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	BBS2	Q9BXC9	721 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	NAT10	Q9H0A0	1025 aa	Known RBP	13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	ST7	Q9NRC1	585 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	SAMSN1	Q9NSI8	373 aa	Known RBP	13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	DEC1	Q9P2X7	70 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	DNAJC12	Q9UKB3	198 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	HBS1L	Q9Y450	684 aa	Known RBP	13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	CEP83	Q9Y592	693 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	DMD	P11532	3685 aa		13.23	□□□□□ -0.29
CLPB-213	ENST00000544382	USP34	Q70CQ2	3546 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	YJEFN3	A6XGL0	299 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382		E7ENQ6	273 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	NEDD8-MDP1	E9PL57	170 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	KAT7	O95251	611 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	CYBB	P04839	570 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	TDGF1	P13385	188 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	CNR2	P34972	360 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	TNFRSF4	P43489	277 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	SEC13	P55735	322 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	SNX16	P57768	344 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	BPIFB4	P59827	614 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	MRPS21	P82921	87 aa	Known RBP	13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	MYL5	Q02045	173 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	KDSR	Q06136	332 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	GAB4	Q2WGN9	574 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	HSF5	Q4G112	596 aa	Predicted RBP	13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	MIIP	Q5JXC2	388 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	FKBP15	Q5T1M5	1219 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382		Q6ZNB5	142 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	TPGS1	Q6ZTW0	290 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	SYT13	Q7L8C5	426 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	TRMT11	Q7Z4G4	463 aa	Known RBP	13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	LONP2	Q86WA8	852 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	TMEM25	Q86YD3	366 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	FMNL3	Q8IVF7	1028 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	CAMKK1	Q8N5S9	505 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	STK32A	Q8WU08	396 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	ZNF606	Q8WXB4	792 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	NDRG1	Q92597	394 aa	Known RBP	13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	NOX5	Q96PH1	765 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	ZSWIM1	Q9BR11	485 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	DNAJC17	Q9NVM6	304 aa	Known RBP	13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	MARK1	Q9P0L2	795 aa		13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	MYO18A	Q92614	2054 aa	Known RBP	13.22	□□□□□ -0.29
CLPB-213	ENST00000544382	CCDC163	A0A0D9SF12	145 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	TBC1D3B	A6NDS4	549 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382		K7ESF4	209 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	PIK3R2	O00459	728 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	GREM1	O60565	184 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	LILRB5	O75023	590 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	TULP3	O75386	442 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	CALCA	P01258	141 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	LTF	P02788	710 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	TYR	P14679	529 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	KRT9	P35527	623 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	GPD2	P43304	727 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	SLC6A11	P48066	632 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	FNTB	P49356	437 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	RAPGEF1	Q13905	1077 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	C2orf27A	Q580R0	203 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	HEATR6	Q6AI08	1181 aa	Known RBP	13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	GRAMD4	Q6IC98	578 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	DENND1B	Q6P3S1	775 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	BHLHA9	Q7RTU4	235 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	WDR5B	Q86VZ2	330 aa		13.21	□□□□□ -0.29
CLPB-213	ENST00000544382	C12orf40	Q86WS4	652 aa		13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms