RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 SIRPGQ9P1W8 387 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 PPME1Q9Y570 386 aa13.11□□□□□ -0.31
SMG8-202ENST00000543872 IGLV3-22A0A075B6J6 115 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 KLHL41O60662 606 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 CD48P09326 243 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 PSMC3P17980 439 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 ECE1P42892 770 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 FLOT2Q14254 428 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 FAM102BQ5T8I3 360 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 RC3H1Q5TC82 1133 aaKnown RBP13.1□□□□□ -0.31
SMG8-202ENST00000543872 LGSNQ5TDP6 509 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 CLVS1Q8IUQ0 354 aaPredicted RBP13.1□□□□□ -0.31
SMG8-202ENST00000543872 WRNIP1Q96S55 665 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 KCNK16Q96T55 309 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 OSBPL6Q9BZF3 934 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 PARVAQ9NVD7 372 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 RAB26Q9ULW5 256 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 A0A0B4J269 797 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 FBP2O00757 339 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 UFL1O94874 794 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 GNA15P30679 374 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 SCN7AQ01118 1682 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 GABPAQ06546 454 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 WDR44Q5JSH3 913 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 ZNF778Q96MU6 729 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 STRA6Q9BX79 667 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 SEMA6AQ9H2E6 1030 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 TBCCD1Q9NVR7 557 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 COQ6Q9Y2Z9 468 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 DAGLAQ9Y4D2 1042 aa13.1□□□□□ -0.31
SMG8-202ENST00000543872 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.1□□□□□ -0.31
SMG8-202ENST00000543872 IL1BP01584 269 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 CD1EP15812 388 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 TNNI1P19237 187 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 CDKN2BP42772 138 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 NUDT2P50583 147 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 NOMO3P69849 1222 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 PDAP1Q13442 181 aaKnown RBP13.09□□□□□ -0.31
SMG8-202ENST00000543872 PTAR1Q7Z6K3 402 aaPredicted RBP13.09□□□□□ -0.31
SMG8-202ENST00000543872 CROCCP3Q8IVE0 287 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 SLC35B2Q8TB61 432 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 NLRP7Q8WX94 980 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 FAF2Q96CS3 445 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 NRDE2Q9H7Z3 1164 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 C6orf203Q9P0P8 240 aaPredicted RBP13.09□□□□□ -0.31
SMG8-202ENST00000543872 PCSK1NQ9UHG2 260 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 ITGA11Q9UKX5 1188 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 ARHGAP26Q9UNA1 814 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 SCINQ9Y6U3 715 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 MYH9P35579 1960 aaKnown RBP13.09□□□□□ -0.31
SMG8-202ENST00000543872 DYTNA2CJ06 578 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 PIK3R2O00459 728 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 SERPINB7O75635 380 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 OCM2P0CE71 109 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 OCMP0CE72 109 aaPredicted RBP13.09□□□□□ -0.31
SMG8-202ENST00000543872 RPL10P27635 214 aaKnown RBP13.09□□□□□ -0.31
SMG8-202ENST00000543872 SERPINB5P36952 375 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 SLC1A6P48664 564 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 TCP10Q12799 353 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 TATDN1Q6P1N9 297 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 RFX6Q8HWS3 928 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 SNX27Q96L92 541 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 CDRT15Q96T59 188 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 PKP2Q99959 881 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 FAM213AQ9BRX8 229 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 HAUS8Q9BT25 410 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 NUF2Q9BZD4 464 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 TBC1D23Q9NUY8 699 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 ZC3H7BQ9UGR2 993 aaKnown RBP13.09□□□□□ -0.31
SMG8-202ENST00000543872 TAF1LQ8IZX4 1826 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 KANSL1LA0AUZ9 987 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 TMX2-CTNND1H3BSU7 103 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 RFPL1O75677 317 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 P4HBP07237 508 aaKnown RBP13.09□□□□□ -0.31
SMG8-202ENST00000543872 SCNN1DP51172 638 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 EIF3EP60228 445 aaKnown RBP13.09□□□□□ -0.31
SMG8-202ENST00000543872 OGDHQ02218 1023 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 ZNF394Q53GI3 561 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 PLEKHA7Q6IQ23 1121 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 KRT80Q6KB66 452 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 OGFOD2Q6N063 350 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 DNAJC24Q6P3W2 148 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 ZSCAN18Q8TBC5 510 aaPredicted RBP13.09□□□□□ -0.31
SMG8-202ENST00000543872 LRRN4Q8WUT4 740 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 HSPH1Q92598 858 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 THAP11Q96EK4 314 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 COX4I2Q96KJ9 171 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 PLK2Q9NYY3 685 aa13.09□□□□□ -0.31
SMG8-202ENST00000543872 DDX60LQ5H9U9 1706 aaKnown RBP13.09□□□□□ -0.31
SMG8-202ENST00000543872 CBFA2T3O75081 653 aa13.08□□□□□ -0.31
SMG8-202ENST00000543872 COX4I1P13073 169 aa13.08□□□□□ -0.31
SMG8-202ENST00000543872 IDH3AP50213 366 aa13.08□□□□□ -0.31
SMG8-202ENST00000543872 RPL26P61254 145 aaKnown RBP13.08□□□□□ -0.31
SMG8-202ENST00000543872 GTF2IP78347 998 aa13.08□□□□□ -0.31
SMG8-202ENST00000543872 APOFQ13790 326 aa13.08□□□□□ -0.31
SMG8-202ENST00000543872 DPYSL3Q14195 570 aa13.08□□□□□ -0.31
SMG8-202ENST00000543872 EME1Q96AY2 570 aa13.08□□□□□ -0.31
SMG8-202ENST00000543872 TRIM17Q9Y577 477 aa13.08□□□□□ -0.31
SMG8-202ENST00000543872 E7ESA3 106 aa13.08□□□□□ -0.32
SMG8-202ENST00000543872 FBXO21O94952 628 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms