RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 KCTD13Q8WZ19 329 aa13.77□□□□□ -0.21
TNFRSF1A-215ENST00000543359 ACDQ96AP0 544 aa13.77□□□□□ -0.21
TNFRSF1A-215ENST00000543359 ZC3H10Q96K80 434 aaKnown RBP13.77□□□□□ -0.21
TNFRSF1A-215ENST00000543359 NT5C1BQ96P26 610 aa13.77□□□□□ -0.21
TNFRSF1A-215ENST00000543359 ULBP1Q9BZM6 244 aa13.77□□□□□ -0.21
TNFRSF1A-215ENST00000543359 DLL3Q9NYJ7 618 aa13.77□□□□□ -0.21
TNFRSF1A-215ENST00000543359 MMP17Q9ULZ9 603 aa13.77□□□□□ -0.21
TNFRSF1A-215ENST00000543359 CNTN6Q9UQ52 1028 aa13.77□□□□□ -0.21
TNFRSF1A-215ENST00000543359 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 SGK1O00141 431 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 AXIN1O15169 862 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 LRP3O75074 770 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 RPP40O75818 363 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 APODP05090 189 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 CISD3P0C7P0 127 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 RALAP11233 206 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 CD19P15391 556 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 KDSRQ06136 332 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 BST2Q10589 180 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 EFEMP1Q12805 493 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 CNGA2Q16280 664 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 CRY1Q16526 586 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 ANO4Q32M45 955 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 RASSF3Q86WH2 238 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 CCDC33Q8N5R6 958 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 ALLCQ8N6M5 410 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 CDK5RAP1Q96SZ6 601 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 RWDD2AQ9UIY3 292 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 FBXO10Q9UK96 956 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 GMEB2Q9UKD1 530 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 RAB23Q9ULC3 237 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 STARD13Q9Y3M8 1113 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 PCDHB4Q9Y5E5 795 aa13.76□□□□□ -0.21
TNFRSF1A-215ENST00000543359 YJEFN3A6XGL0 299 aa13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 E7ENQ6 273 aa13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 CACNG3O60359 315 aa13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 AFPP02771 609 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 SETSIPP0DME0 302 aa13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 YWHAGP61981 247 aaKnown RBP eCLIP13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 COG7P83436 770 aa13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 SPEM2Q0P670 501 aa13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 PMF1Q6P1K2 205 aa13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 CLEC17AQ6ZS10 378 aa13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 CACNA2D4Q7Z3S7 1137 aa13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 TADA2BQ86TJ2 420 aa13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 MIB1Q86YT6 1006 aa13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 SCML4Q8N228 414 aa13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 ARHGAP18Q8N392 663 aa13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 PPM1KQ8N3J5 372 aa13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 TERB1Q8NA31 727 aa13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 TXNDC5Q8NBS9 432 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 KCNV2Q8TDN2 545 aa13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 SECISBP2LQ93073 1101 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 LOXL4Q96JB6 756 aa13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 ZDHHC4Q9NPG8 344 aa13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 WDR35Q9P2L0 1181 aa13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 DEC1Q9P2X7 70 aa13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.75□□□□□ -0.21
TNFRSF1A-215ENST00000543359 GON4LQ3T8J9 2241 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 TBC1D3BA6NDS4 549 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 DCLK1O15075 740 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 KLF8O95600 359 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 PENKP01210 267 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 TYRP14679 529 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 TIE1P35590 1138 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 RPL34P49207 117 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 DGKEP52429 567 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 SLC8A3P57103 927 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 DAOAP59103 153 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 GOLGA8FQ08AF8 430 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 GOLGA8DPQ0D2H9 430 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 ADIGQ0VDE8 80 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 CETN1Q12798 172 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 TRIP4Q15650 581 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 CSRP2Q16527 193 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 RSPO4Q2I0M5 234 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 PLK5Q496M5 336 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 HSF5Q4G112 596 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 FYB2Q5VWT5 728 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 BSPRYQ5W0U4 402 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 BTBD8Q5XKL5 378 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 TPGS1Q6ZTW0 290 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 TOGARAM2Q6ZUX3 1019 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 CEP68Q76N32 757 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 FAM217AQ8IXS0 508 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 RBBP8NLQ8NC74 664 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 TSTD1Q8NFU3 115 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 OLIG1Q8TAK6 271 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 CNOT6LQ96LI5 555 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 BBS2Q9BXC9 721 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 INTS2Q9H0H0 1204 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 DUSP15Q9H1R2 295 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 CLSTN2Q9H4D0 955 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 LRRC4Q9HBW1 653 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 CD248Q9HCU0 757 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 SEMA4GQ9NTN9 838 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 MARCH2Q9P0N8 246 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 HESX1Q9UBX0 185 aa13.74□□□□□ -0.21
TNFRSF1A-215ENST00000543359 RASAL2Q9UJF2 1139 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms