RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 SLC35B2Q8TB61 432 aa9.71□□□□□ -0.85
GNE-206ENST00000543356 PGAP3Q96FM1 320 aaPredicted RBP9.71□□□□□ -0.85
GNE-206ENST00000543356 C8orf48Q96LL4 319 aa9.71□□□□□ -0.85
GNE-206ENST00000543356 CCDC114Q96M63 670 aa9.71□□□□□ -0.85
GNE-206ENST00000543356 NEUROG2Q9H2A3 272 aa9.71□□□□□ -0.85
GNE-206ENST00000543356 CWH43Q9H720 699 aa9.71□□□□□ -0.85
GNE-206ENST00000543356 GRHL1Q9NZI5 618 aa9.71□□□□□ -0.85
GNE-206ENST00000543356 HPCAL4Q9UM19 191 aa9.71□□□□□ -0.85
GNE-206ENST00000543356 RRP15Q9Y3B9 282 aaKnown RBP9.71□□□□□ -0.85
GNE-206ENST00000543356 MYO16Q9Y6X6 1858 aa9.71□□□□□ -0.85
GNE-206ENST00000543356 TRIM43BA6NCK2 446 aa9.71□□□□□ -0.86
GNE-206ENST00000543356 TNFRSF10BO14763 440 aa9.71□□□□□ -0.86
GNE-206ENST00000543356 AMHP03971 560 aa9.71□□□□□ -0.86
GNE-206ENST00000543356 FAM153BP0C7A2 387 aa9.71□□□□□ -0.86
GNE-206ENST00000543356 SMARCB1Q12824 385 aa9.71□□□□□ -0.86
GNE-206ENST00000543356 FAM153CQ494X1 144 aa9.71□□□□□ -0.86
GNE-206ENST00000543356 ZC3H12AQ5D1E8 599 aaKnown RBP9.71□□□□□ -0.86
GNE-206ENST00000543356 ZDHHC24Q6UX98 284 aa9.71□□□□□ -0.86
GNE-206ENST00000543356 CCHCR1Q8TD31 782 aa9.71□□□□□ -0.86
GNE-206ENST00000543356 BCL7CQ8WUZ0 217 aaPredicted RBP9.71□□□□□ -0.86
GNE-206ENST00000543356 TOP1MTQ969P6 601 aa9.71□□□□□ -0.86
GNE-206ENST00000543356 TRIM43Q96BQ3 446 aaPredicted RBP9.71□□□□□ -0.86
GNE-206ENST00000543356 RNF157Q96PX1 679 aa9.71□□□□□ -0.86
GNE-206ENST00000543356 SLC9A7Q96T83 725 aa9.71□□□□□ -0.86
GNE-206ENST00000543356 TMEM106CQ9BVX2 250 aa9.71□□□□□ -0.86
GNE-206ENST00000543356 TRIM31Q9BZY9 425 aa9.71□□□□□ -0.86
GNE-206ENST00000543356 RC3H2Q9HBD1 1191 aaKnown RBP9.71□□□□□ -0.86
GNE-206ENST00000543356 WHRNQ9P202 907 aa9.71□□□□□ -0.86
GNE-206ENST00000543356 RCOR3Q9P2K3 495 aaPredicted RBP9.71□□□□□ -0.86
GNE-206ENST00000543356 FAM153AQ9UHL3 310 aa9.71□□□□□ -0.86
GNE-206ENST00000543356 DNPEPQ9ULA0 475 aa9.71□□□□□ -0.86
GNE-206ENST00000543356 AP4E1Q9UPM8 1137 aa9.71□□□□□ -0.86
GNE-206ENST00000543356 PCDHB5Q9Y5E4 795 aa9.71□□□□□ -0.86
GNE-206ENST00000543356 CAPN9O14815 690 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 TGM2P21980 687 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 IL4RP24394 825 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 CYP2F1P24903 491 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 L1CAMP32004 1257 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 HSPA9P38646 679 aaKnown RBP9.7□□□□□ -0.86
GNE-206ENST00000543356 GRIK1P39086 918 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 CDR1P51861 262 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 SLC5A3P53794 718 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 ATXN1P54253 815 aaKnown RBP9.7□□□□□ -0.86
GNE-206ENST00000543356 OTUD4Q01804 1114 aaKnown RBP9.7□□□□□ -0.86
GNE-206ENST00000543356 CA9Q16790 459 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 SYPL2Q5VXT5 272 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 SLC9A4Q6AI14 798 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 MFSD5Q6N075 450 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 ANKS3Q6ZW76 656 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 CEP57Q86XR8 500 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 RNF168Q8IYW5 571 aaPredicted RBP9.7□□□□□ -0.86
GNE-206ENST00000543356 ALLCQ8N6M5 410 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 CCDC185Q8N715 623 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 C2orf15Q8WU43 125 aaKnown RBP9.7□□□□□ -0.86
GNE-206ENST00000543356 NTAN1Q96AB6 310 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 ZNF689Q96CS4 500 aaPredicted RBP9.7□□□□□ -0.86
GNE-206ENST00000543356 TTPALQ9BTX7 342 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 MAK16Q9BXY0 300 aaKnown RBP9.7□□□□□ -0.86
GNE-206ENST00000543356 GPATCH2LQ9NWQ4 482 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 ABI2Q9NYB9 513 aaPredicted RBP9.7□□□□□ -0.86
GNE-206ENST00000543356 FZD10Q9ULW2 581 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 NAALADL1Q9UQQ1 740 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 SNX24Q9Y343 169 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 CARNS1A5YM72 827 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 M0QYT0 321 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 BAIAP3O94812 1187 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 UPP2O95045 317 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 ITGB8P26012 769 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 KLRC2P26717 231 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 DYNLT1P63172 113 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 DEUP1Q05D60 604 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 MMRN1Q13201 1228 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 ZSCAN26Q16670 478 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 TTC31Q49AM3 519 aaPredicted RBP9.7□□□□□ -0.86
GNE-206ENST00000543356 ANKRD20A8PQ5CZ79 823 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 RTP2Q5QGT7 225 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 ZNF365Q70YC5 407 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 TMEM173Q86WV6 379 aaPredicted RBP9.7□□□□□ -0.86
GNE-206ENST00000543356 TMEM199Q8N511 208 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 CCDC89Q8N998 374 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 ACTL9Q8TC94 416 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 ART4Q93070 314 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 SNF8Q96H20 258 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 GDAP1L1Q96MZ0 367 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 KCTD15Q96SI1 283 aaPredicted RBP9.7□□□□□ -0.86
GNE-206ENST00000543356 FMO2Q99518 471 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 FAM118BQ9BPY3 351 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 PRDM5Q9NQX1 630 aaPredicted RBP9.7□□□□□ -0.86
GNE-206ENST00000543356 MTMR10Q9NXD2 777 aa9.7□□□□□ -0.86
GNE-206ENST00000543356 APOL1O14791 398 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 F9P00740 461 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 HSPA1AP0DMV8 641 aaKnown RBP9.69□□□□□ -0.86
GNE-206ENST00000543356 HSPA1BP0DMV9 641 aaKnown RBP9.69□□□□□ -0.86
GNE-206ENST00000543356 NCAM1P13591 858 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 ATF2P15336 505 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 CSF2RAP15509 400 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 RAG1P15918 1043 aa9.69□□□□□ -0.86
GNE-206ENST00000543356 ALDH7A1P49419 539 aaKnown RBP9.69□□□□□ -0.86
GNE-206ENST00000543356 WDR5P61964 334 aaKnown RBP9.69□□□□□ -0.86
GNE-206ENST00000543356 PITX1P78337 314 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms