RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 ATP2A3Q93084 1043 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 ATP6V1E2Q96A05 226 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 KTI12Q96EK9 354 aaPredicted RBP4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 BORCS6Q96GS4 357 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 GPHA2Q96T91 129 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 GPR20Q99678 358 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 NUDT22Q9BRQ3 303 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 ZCWPW1Q9H0M4 648 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 L2HGDHQ9H9P8 463 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 IL23AQ9NPF7 189 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 DIAPH3Q9NSV4 1193 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 LIN7CQ9NUP9 197 aaKnown RBP4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 TMLHEQ9NVH6 421 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 ETAA1Q9NY74 926 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 TAS2R10Q9NYW0 307 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 CNOT7Q9UIV1 285 aaKnown RBP4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 RPS6KA6Q9UK32 745 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 PCDHGB4Q9UN71 923 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 NAALADL1Q9UQQ1 740 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 PCDHA5Q9Y5H7 936 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 SNX8Q9Y5X2 465 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 PIAS3Q9Y6X2 628 aa4.33□□□□□ -1.72
SFSWAP-211ENST00000542813 POLRMTO00411 1230 aaKnown RBP4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 PEX12O00623 359 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 CD3EAPO15446 510 aaKnown RBP4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 SEPT4O43236 478 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 GUCY1B2O75343 617 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 TSPAN9O75954 239 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 CER1O95813 267 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 CYP21A2P08686 494 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 ZNF888P0CJ79 500 aaPredicted RBP4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 CHRM3P20309 590 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 SLC6A2P23975 617 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 CTNNA1P35221 906 aaKnown RBP4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 PXNP49023 591 aaPredicted RBP4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 TOB1P50616 345 aaPredicted RBP4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 DGKEP52429 567 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 PRKAG1P54619 331 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 HSPA2P54652 639 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 LOXL3P58215 753 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 NLRP5P59047 1200 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 KRTAP10-2P60368 255 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 KRT83P78385 493 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 MC1RQ01726 317 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 CREB5Q02930 508 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 HGFACQ04756 655 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 PIGFQ07326 219 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 CDC16Q13042 620 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 CHAF1BQ13112 559 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 NFIL3Q16649 462 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 BMT2Q1RMZ1 405 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 VMACQ2NL98 169 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 TBC1D10BQ4KMP7 808 aaPredicted RBP4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 ZMAT1Q5H9K5 638 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 PRR31Q5SQ13 230 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 ATXN7L2Q5T6C5 722 aaPredicted RBP4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 LIPMQ5VYY2 423 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 ZKSCAN2Q63HK3 967 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 RASGRP2Q7LDG7 609 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 IGDCC3Q8IVU1 814 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 SPARTQ8N0X7 666 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 ANKRD44Q8N8A2 993 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 LINC01356Q8N9X3 169 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 PSD4Q8NDX1 1056 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 MBD3L2Q8NHZ7 208 aaPredicted RBP4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 NFKBIDQ8NI38 313 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 SSH3Q8TE77 659 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 SLC22A17Q8WUG5 538 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 PPP2R3CQ969Q6 453 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 ZDHHC12Q96GR4 267 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 RBM17Q96I25 401 aaKnown RBP4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 AJUBAQ96IF1 538 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 TEPSINQ96N21 525 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 YME1L1Q96TA2 773 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 SMOQ99835 787 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 MXD3Q9BW11 206 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 TLR10Q9BXR5 811 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 USP44Q9H0E7 712 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 SLC25A18Q9H1K4 315 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 RMI1Q9H9A7 625 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 BRF2Q9HAW0 419 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 IL21RQ9HBE5 538 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 SEPT11Q9NVA2 429 aaKnown RBP4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 VPS51Q9UID3 782 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 BAG5Q9UL15 447 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 USP22Q9UPT9 525 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 CDYLQ9Y232 598 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 TMEM5Q9Y2B1 443 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 PSAT1Q9Y617 370 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 RAD54BQ9Y620 910 aa4.32□□□□□ -1.72
SFSWAP-211ENST00000542813 UHRF1BP1LA0JNW5 1464 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 BICDL2A1A5D9 508 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 TBKBP1A7MCY6 615 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 H7C0S8 307 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 TSPAN4O14817 238 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 LMNAP02545 664 aaKnown RBP4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 ITGB1P05556 798 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 ADRB2P07550 413 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 ADRB1P08588 477 aa4.31□□□□□ -1.72
SFSWAP-211ENST00000542813 CSH1P0DML2 217 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms