RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 ASMTLO95671 621 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 MOCS2O96007 188 aaPredicted RBP8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 CST3P01034 146 aaPredicted RBP8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 IL10P22301 178 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 FOXN2P32314 431 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 TNFSF9P41273 254 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 WDR4P57081 412 aaKnown RBP8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 TGFB2P61812 414 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 MMRN1Q13201 1228 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 LAMC2Q13753 1193 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 FASTKD5Q7L8L6 764 aaKnown RBP8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 SCN4BQ8IWT1 228 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 RNF157Q96PX1 679 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 PHACTR1Q9C0D0 580 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 KLHL4Q9C0H6 718 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 ELP3Q9H9T3 547 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 NSMCE4AQ9NXX6 385 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 ARHGAP28Q9P2N2 729 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 ANGPTL3Q9Y5C1 460 aa8.47□□□□□ -1.05
PRKAB1-207ENST00000542698 LAMA4Q16363 1823 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 GOLGA8CPA6NN73 597 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 TCEA3O75764 348 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 WFS1O76024 890 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 NPTXRO95502 500 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 PROCP04070 461 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 CYP1A1P04798 512 aaPredicted RBP8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 PGK2P07205 417 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 SETSIPP0DME0 302 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 CA8P35219 290 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 GP5P40197 560 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 RANBP1P43487 201 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 ZNF143P52747 638 aaPredicted RBP8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 YWHAHQ04917 246 aaPredicted RBP8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 PDPK2PQ6A1A2 396 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 C16orf46Q6P387 395 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 LCA5Q86VQ0 697 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 TDRPQ86YL5 185 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 PBXIP1Q96AQ6 731 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 SGF29Q96ES7 293 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 PIH1D1Q9NWS0 290 aaKnown RBP8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 PKD1L3Q7Z443 1732 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 hCG_2014768A0A024R1R8 64 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 LACTBL1A8MY62 500 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 GSC2O15499 205 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 ZNF862O60290 1169 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 ATP4AP20648 1035 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 AMPD1P23109 780 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 CDKN2BP42772 138 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 NR2C2P49116 596 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 BCAT1P54687 386 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 POU5F1Q01860 360 aaKnown RBP8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 TBL3Q12788 808 aaKnown RBP8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 MPP3Q13368 585 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 SEL1L3Q68CR1 1132 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 SIAH1Q8IUQ4 282 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 TRAPPC12Q8WVT3 735 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 HTR3CQ8WXA8 447 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 DTNBP1Q96EV8 351 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 ETNK2Q9NVF9 386 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 SORCS3Q9UPU3 1222 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 CHKBQ9Y259 395 aa8.46□□□□□ -1.05
PRKAB1-207ENST00000542698 COL16A1Q07092 1604 aaPredicted RBP8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 DCXO43602 365 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 TRUB2O95900 331 aaKnown RBP8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 VTNP04004 478 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 ATP5BP06576 529 aaKnown RBP8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 NCAM1P13591 858 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 NOVP48745 357 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 SERPINB8P50452 374 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 STX5Q13190 355 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 CAPSQ13938 189 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 ZNF484Q5JVG2 852 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 HABP4Q5JVS0 413 aaKnown RBP8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 WLSQ5T9L3 541 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 PPHLN1Q8NEY8 458 aaKnown RBP8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 JOSD2Q8TAC2 188 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 CPT1BQ92523 772 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 AKT1S1Q96B36 256 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 CPB2Q96IY4 423 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 APOL2Q9BQE5 337 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 ING2Q9H160 280 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 DENND2DQ9H6A0 471 aaPredicted RBP8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 NRDE2Q9H7Z3 1164 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 ARL8BQ9NVJ2 186 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 DDIT4Q9NX09 232 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 IL1RAPL1Q9NZN1 696 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 UBQLN1Q9UMX0 589 aaKnown RBP8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 MYH7P12883 1935 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 NFASCO94856 1347 aa8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 COL22A1Q8NFW1 1626 aaPredicted RBP8.46□□□□□ -1.06
PRKAB1-207ENST00000542698 WDR27A2RRH5 827 aa8.45□□□□□ -1.06
PRKAB1-207ENST00000542698 TRIM13O60858 407 aa8.45□□□□□ -1.06
PRKAB1-207ENST00000542698 AVILO75366 819 aa8.45□□□□□ -1.06
PRKAB1-207ENST00000542698 PTPN20Q4JDL3 420 aa8.45□□□□□ -1.06
PRKAB1-207ENST00000542698 TMEM259Q4ZIN3 620 aa8.45□□□□□ -1.06
PRKAB1-207ENST00000542698 RNASEH2BQ5TBB1 312 aaKnown RBP8.45□□□□□ -1.06
PRKAB1-207ENST00000542698 THEM5Q8N1Q8 247 aa8.45□□□□□ -1.06
PRKAB1-207ENST00000542698 PCYOX1LQ8NBM8 494 aa8.45□□□□□ -1.06
PRKAB1-207ENST00000542698 IPMKQ8NFU5 416 aa8.45□□□□□ -1.06
PRKAB1-207ENST00000542698 RFWD2Q8NHY2 731 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms