RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 CRYBG2Q8N1P7 616 aa16.33■□□□□ 0.2
CLSTN3-213ENST00000541953 TNIP3Q96KP6 325 aa16.33■□□□□ 0.2
CLSTN3-213ENST00000541953 HSPA12BQ96MM6 686 aa16.33■□□□□ 0.2
CLSTN3-213ENST00000541953 CAMK1GQ96NX5 476 aa16.33■□□□□ 0.2
CLSTN3-213ENST00000541953 GABRG3Q99928 467 aa16.33■□□□□ 0.2
CLSTN3-213ENST00000541953 BBS2Q9BXC9 721 aa16.33■□□□□ 0.2
CLSTN3-213ENST00000541953 NACA2Q9H009 215 aa16.33■□□□□ 0.2
CLSTN3-213ENST00000541953 MAGEF1Q9HAY2 307 aa16.33■□□□□ 0.2
CLSTN3-213ENST00000541953 CYLDQ9NQC7 956 aa16.33■□□□□ 0.2
CLSTN3-213ENST00000541953 BAHCC1Q9P281 2608 aa16.33■□□□□ 0.2
CLSTN3-213ENST00000541953 HLA-DRAP01903 254 aa16.32■□□□□ 0.2
CLSTN3-213ENST00000541953 CD59P13987 128 aa16.32■□□□□ 0.2
CLSTN3-213ENST00000541953 SIM1P81133 766 aaPredicted RBP16.32■□□□□ 0.2
CLSTN3-213ENST00000541953 KMT5BQ4FZB7 885 aa16.32■□□□□ 0.2
CLSTN3-213ENST00000541953 SPDYCQ5MJ68 293 aa16.32■□□□□ 0.2
CLSTN3-213ENST00000541953 Q6ZNB5 142 aa16.32■□□□□ 0.2
CLSTN3-213ENST00000541953 SCD5Q86SK9 330 aa16.32■□□□□ 0.2
CLSTN3-213ENST00000541953 CHPFQ8IZ52 775 aa16.32■□□□□ 0.2
CLSTN3-213ENST00000541953 MINDY1Q8N5J2 469 aa16.32■□□□□ 0.2
CLSTN3-213ENST00000541953 MARK1Q9P0L2 795 aa16.32■□□□□ 0.2
CLSTN3-213ENST00000541953 CGNQ9P2M7 1197 aaKnown RBP16.32■□□□□ 0.2
CLSTN3-213ENST00000541953 SLC6A14Q9UN76 642 aa16.32■□□□□ 0.2
CLSTN3-213ENST00000541953 SRRM3A6NNA2 597 aaPredicted RBP16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 AP5Z1O43299 807 aa16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 F13A1P00488 732 aa16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 KLKB1P03952 638 aa16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 NR3C1P04150 777 aa16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 SERPINF2P08697 491 aa16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 FAM200BP0CF97 657 aa16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 TRIM49P0CI25 452 aa16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 TRIM49CP0CI26 452 aa16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 ACO1P21399 889 aaKnown RBP16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 MAOBP27338 520 aa16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 ME1P48163 572 aa16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 DUOXA1Q1HG43 343 aa16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 TRMT11Q7Z4G4 463 aaKnown RBP16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 SLC9A9Q8IVB4 645 aa16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 TRIML1Q8N9V2 468 aa16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 KCNV2Q8TDN2 545 aa16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 ZCCHC14Q8WYQ9 949 aaKnown RBP16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 PAGE5Q96GU1 130 aa16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 MRGPRX1Q96LB2 322 aa16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 TLR8Q9NR97 1041 aaKnown RBP16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 COMMD8Q9NX08 183 aa16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 SCML2Q9UQR0 700 aa16.31■□□□□ 0.2
CLSTN3-213ENST00000541953 ATRXP46100 2492 aa16.3■□□□□ 0.2
CLSTN3-213ENST00000541953 GJB3O75712 270 aa16.3■□□□□ 0.2
CLSTN3-213ENST00000541953 PRR29P0C7W0 189 aa16.3■□□□□ 0.2
CLSTN3-213ENST00000541953 ZSCAN22P10073 491 aaPredicted RBP16.3■□□□□ 0.2
CLSTN3-213ENST00000541953 RARGP13631 454 aa16.3■□□□□ 0.2
CLSTN3-213ENST00000541953 PIK3CAP42336 1068 aa16.3■□□□□ 0.2
CLSTN3-213ENST00000541953 AP3M2P53677 418 aa16.3■□□□□ 0.2
CLSTN3-213ENST00000541953 DNM1Q05193 864 aaKnown RBP16.3■□□□□ 0.2
CLSTN3-213ENST00000541953 PPP3CAQ08209 521 aa16.3■□□□□ 0.2
CLSTN3-213ENST00000541953 INCA1Q0VD86 236 aa16.3■□□□□ 0.2
CLSTN3-213ENST00000541953 SGSM1Q2NKQ1 1148 aa16.3■□□□□ 0.2
CLSTN3-213ENST00000541953 CHCHD4Q8N4Q1 142 aa16.3■□□□□ 0.2
CLSTN3-213ENST00000541953 TAS1R2Q8TE23 839 aa16.3■□□□□ 0.2
CLSTN3-213ENST00000541953 HNRNPABQ99729 332 aaKnown RBP16.3■□□□□ 0.2
CLSTN3-213ENST00000541953 BACH2Q9BYV9 841 aa16.3■□□□□ 0.2
CLSTN3-213ENST00000541953 FBXO44Q9H4M3 255 aa16.3■□□□□ 0.2
CLSTN3-213ENST00000541953 CLEC4EQ9ULY5 219 aa16.3■□□□□ 0.2
CLSTN3-213ENST00000541953 ANKRD11Q6UB99 2663 aaPredicted RBP16.3■□□□□ 0.2
CLSTN3-213ENST00000541953 MUC22E2RYF6 1773 aaPredicted RBP16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 UPK3BL1B0FP48 263 aa16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 UPK3BL2E5RIL1 263 aa16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 TAF4O00268 1085 aa16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 ARHGAP33O14559 1287 aa16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 STC2O76061 302 aa16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 CD58P19256 250 aa16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 HOXD12P35452 270 aa16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 ATP5C1P36542 298 aaKnown RBP16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 DGKGP49619 791 aa16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 GFPT1Q06210 699 aaPredicted RBP16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 BYSLQ13895 437 aaKnown RBP16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 GEN1Q17RS7 908 aa16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 CEP135Q66GS9 1140 aa16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 KIAA1324Q6UXG2 1013 aaKnown RBP16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 UNC93AQ86WB7 457 aa16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 GOLGA5Q8TBA6 731 aa16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 TMEM174Q8WUU8 243 aa16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 CYFIP2Q96F07 1278 aa16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 MKRN2Q9H000 416 aaKnown RBP16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 NEUROG3Q9Y4Z2 214 aa16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 CKAP5Q14008 2032 aa16.29■□□□□ 0.2
CLSTN3-213ENST00000541953 PLXNB3Q9ULL4 1909 aa16.28■□□□□ 0.2
CLSTN3-213ENST00000541953 KCNJ18B7U540 433 aa16.28■□□□□ 0.2
CLSTN3-213ENST00000541953 CAPNS1P04632 268 aa16.28■□□□□ 0.2
CLSTN3-213ENST00000541953 HMBSP08397 361 aa16.28■□□□□ 0.2
CLSTN3-213ENST00000541953 SLFN14P0C7P3 912 aa16.28■□□□□ 0.2
CLSTN3-213ENST00000541953 IL12RB1P42701 662 aa16.28■□□□□ 0.2
CLSTN3-213ENST00000541953 GCLMP48507 274 aa16.28■□□□□ 0.2
CLSTN3-213ENST00000541953 KIF11P52732 1056 aa16.28■□□□□ 0.2
CLSTN3-213ENST00000541953 FUT11Q495W5 492 aa16.28■□□□□ 0.2
CLSTN3-213ENST00000541953 C10orf120Q5SQS8 335 aa16.28■□□□□ 0.2
CLSTN3-213ENST00000541953 PPP1R26Q5T8A7 1209 aaPredicted RBP16.28■□□□□ 0.2
CLSTN3-213ENST00000541953 FYB2Q5VWT5 728 aa16.28■□□□□ 0.2
CLSTN3-213ENST00000541953 SLC36A4Q6YBV0 504 aa16.28■□□□□ 0.2
CLSTN3-213ENST00000541953 CACUL1Q86Y37 369 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms