RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 STON1Q9Y6Q2 735 aa12.5□□□□□ -0.41
COPA-205ENST00000541366 ATMQ13315 3056 aa12.49□□□□□ -0.41
COPA-205ENST00000541366 A8MXQ7 604 aa12.49□□□□□ -0.41
COPA-205ENST00000541366 PLK4O00444 970 aa12.49□□□□□ -0.41
COPA-205ENST00000541366 RTN3O95197 1032 aaPredicted RBP12.49□□□□□ -0.41
COPA-205ENST00000541366 ZDHHC11BP0C7U3 371 aa12.49□□□□□ -0.41
COPA-205ENST00000541366 PLA2G2AP14555 144 aa12.49□□□□□ -0.41
COPA-205ENST00000541366 LONP1P36776 959 aaKnown RBP12.49□□□□□ -0.41
COPA-205ENST00000541366 DGKGP49619 791 aa12.49□□□□□ -0.41
COPA-205ENST00000541366 TPMTP51580 245 aa12.49□□□□□ -0.41
COPA-205ENST00000541366 SLC5A3P53794 718 aa12.49□□□□□ -0.41
COPA-205ENST00000541366 DUOXA2Q1HG44 320 aa12.49□□□□□ -0.41
COPA-205ENST00000541366 SNX30Q5VWJ9 437 aa12.49□□□□□ -0.41
COPA-205ENST00000541366 LAYNQ6UX15 382 aa12.49□□□□□ -0.41
COPA-205ENST00000541366 HTR3DQ70Z44 454 aa12.49□□□□□ -0.41
COPA-205ENST00000541366 TRAPPC11Q7Z392 1133 aa12.49□□□□□ -0.41
COPA-205ENST00000541366 B3GALNT2Q8NCR0 500 aa12.49□□□□□ -0.41
COPA-205ENST00000541366 PDZD8Q8NEN9 1154 aa12.49□□□□□ -0.41
COPA-205ENST00000541366 OVCA2Q8WZ82 227 aa12.49□□□□□ -0.41
COPA-205ENST00000541366 XPO6Q96QU8 1125 aaKnown RBP12.49□□□□□ -0.41
COPA-205ENST00000541366 CDC6Q99741 560 aa12.49□□□□□ -0.41
COPA-205ENST00000541366 NACA2Q9H009 215 aa12.49□□□□□ -0.41
COPA-205ENST00000541366 ITM2CQ9NQX7 267 aa12.49□□□□□ -0.41
COPA-205ENST00000541366 METTL12A8MUP2 240 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 MDM4O15151 490 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 FLRT2O43155 660 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 TLR5O60602 858 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 TACC1O75410 805 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 IDEP14735 1019 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 GAP43P17677 238 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 IL12RB1P42701 662 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 CDH8P55286 799 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 SMAD1Q15797 465 aaKnown RBP12.48□□□□□ -0.41
COPA-205ENST00000541366 PTPRNQ16849 979 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 KIF19Q2TAC6 998 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 WDR72Q3MJ13 1102 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 METTL3Q86U44 580 aaKnown RBP12.48□□□□□ -0.41
COPA-205ENST00000541366 FAM35AQ86V20 835 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 FAM124AQ86V42 546 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 TMPRSS6Q8IU80 811 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 GALNT15Q8N3T1 639 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 PDCD7Q8N8D1 485 aaKnown RBP12.48□□□□□ -0.41
COPA-205ENST00000541366 CADM4Q8NFZ8 388 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 SNX19Q92543 992 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 KIF2CQ99661 725 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 MED10Q9BTT4 135 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 KLF16Q9BXK1 252 aaPredicted RBP12.48□□□□□ -0.41
COPA-205ENST00000541366 PRORYQ9H606 182 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 IL37Q9NZH6 218 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 MARK1Q9P0L2 795 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 SEL1LQ9UBV2 794 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 NUDT5Q9UKK9 219 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 NFE2L3Q9Y4A8 694 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 PCDHB13Q9Y5F0 798 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 SNX11Q9Y5W9 270 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 MYH10P35580 1976 aa12.48□□□□□ -0.41
COPA-205ENST00000541366 ZNF233A6NK53 670 aa12.47□□□□□ -0.41
COPA-205ENST00000541366 H3BQV1 296 aa12.47□□□□□ -0.41
COPA-205ENST00000541366 GFRA2O00451 464 aa12.47□□□□□ -0.41
COPA-205ENST00000541366 ATXN7O15265 892 aaPredicted RBP12.47□□□□□ -0.41
COPA-205ENST00000541366 TLX3O43711 291 aaPredicted RBP12.47□□□□□ -0.41
COPA-205ENST00000541366 BEST1O76090 585 aa12.47□□□□□ -0.41
COPA-205ENST00000541366 DLATP10515 647 aaKnown RBP12.47□□□□□ -0.41
COPA-205ENST00000541366 EIF2S3P41091 472 aaKnown RBP12.47□□□□□ -0.41
COPA-205ENST00000541366 TUBP50607 506 aa12.47□□□□□ -0.41
COPA-205ENST00000541366 IL9RQ01113 521 aa12.47□□□□□ -0.41
COPA-205ENST00000541366 STARD3Q14849 445 aa12.47□□□□□ -0.41
COPA-205ENST00000541366 KCNT1Q5JUK3 1230 aa12.47□□□□□ -0.41
COPA-205ENST00000541366 LARP1BQ659C4 914 aaKnown RBP12.47□□□□□ -0.41
COPA-205ENST00000541366 IL27RAQ6UWB1 636 aa12.47□□□□□ -0.41
COPA-205ENST00000541366 ZNF843Q8N446 348 aa12.47□□□□□ -0.41
COPA-205ENST00000541366 RDH13Q8NBN7 331 aa12.47□□□□□ -0.41
COPA-205ENST00000541366 ZMIZ2Q8NF64 920 aa12.47□□□□□ -0.41
COPA-205ENST00000541366 HPS3Q969F9 1004 aa12.47□□□□□ -0.41
COPA-205ENST00000541366 SIPA1Q96FS4 1042 aa12.47□□□□□ -0.41
COPA-205ENST00000541366 DUSP9Q99956 384 aaKnown RBP12.47□□□□□ -0.41
COPA-205ENST00000541366 C6orf106Q9H6K1 298 aaPredicted RBP12.47□□□□□ -0.41
COPA-205ENST00000541366 SMYD3Q9H7B4 428 aa12.47□□□□□ -0.41
COPA-205ENST00000541366 OSER1Q9NX31 292 aa12.47□□□□□ -0.41
COPA-205ENST00000541366 WDR35Q9P2L0 1181 aa12.47□□□□□ -0.41
COPA-205ENST00000541366 NXF1Q9UBU9 619 aaKnown RBP12.47□□□□□ -0.41
COPA-205ENST00000541366 PCDHGB2Q9Y5G2 931 aa12.47□□□□□ -0.41
COPA-205ENST00000541366 MUC22E2RYF6 1773 aaPredicted RBP12.47□□□□□ -0.41
COPA-205ENST00000541366 FAM92AA1XBS5 289 aa12.46□□□□□ -0.41
COPA-205ENST00000541366 CBX4O00257 560 aa12.46□□□□□ -0.41
COPA-205ENST00000541366 TNFSF14O43557 240 aa12.46□□□□□ -0.41
COPA-205ENST00000541366 AP1G2O75843 785 aa12.46□□□□□ -0.41
COPA-205ENST00000541366 GJB2P29033 226 aa12.46□□□□□ -0.41
COPA-205ENST00000541366 HOXD13P35453 343 aa12.46□□□□□ -0.41
COPA-205ENST00000541366 COPAP53621 1224 aa12.46□□□□□ -0.41
COPA-205ENST00000541366 MYL6P60660 151 aa12.46□□□□□ -0.41
COPA-205ENST00000541366 TNNC1P63316 161 aa12.46□□□□□ -0.41
COPA-205ENST00000541366 SEMG2Q02383 582 aa12.46□□□□□ -0.41
COPA-205ENST00000541366 ORC1Q13415 861 aa12.46□□□□□ -0.41
COPA-205ENST00000541366 SF3A1Q15459 793 aaKnown RBP12.46□□□□□ -0.41
COPA-205ENST00000541366 GEN1Q17RS7 908 aa12.46□□□□□ -0.41
COPA-205ENST00000541366 GPRIN1Q7Z2K8 1008 aa12.46□□□□□ -0.41
COPA-205ENST00000541366 ZNF605Q86T29 641 aa12.46□□□□□ -0.41
COPA-205ENST00000541366 WDR49Q8IV35 697 aa12.46□□□□□ -0.41
COPA-205ENST00000541366 ZNF516Q92618 1163 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms