RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 PRKD1Q15139 912 aaPredicted RBP13□□□□□ -0.33
RNF4-222ENST00000541204 PPP1R26Q5T8A7 1209 aaPredicted RBP13□□□□□ -0.33
RNF4-222ENST00000541204 NAIF1Q69YI7 327 aaPredicted RBP13□□□□□ -0.33
RNF4-222ENST00000541204 RINLQ6ZS11 566 aa13□□□□□ -0.33
RNF4-222ENST00000541204 ZC3H18Q86VM9 953 aaKnown RBP13□□□□□ -0.33
RNF4-222ENST00000541204 SPATA18Q8TC71 538 aa13□□□□□ -0.33
RNF4-222ENST00000541204 LRRN4Q8WUT4 740 aa13□□□□□ -0.33
RNF4-222ENST00000541204 DNAJB3Q8WWF6 145 aa13□□□□□ -0.33
RNF4-222ENST00000541204 DNAJC9Q8WXX5 260 aa13□□□□□ -0.33
RNF4-222ENST00000541204 EMID1Q96A84 441 aaPredicted RBP13□□□□□ -0.33
RNF4-222ENST00000541204 NSL1Q96IY1 281 aa13□□□□□ -0.33
RNF4-222ENST00000541204 MIS12Q9H081 205 aa13□□□□□ -0.33
RNF4-222ENST00000541204 MORF4L1Q9UBU8 362 aa13□□□□□ -0.33
RNF4-222ENST00000541204 ITGA11Q9UKX5 1188 aa13□□□□□ -0.33
RNF4-222ENST00000541204 IQANK1A0A1B0GTG1 560 aa13□□□□□ -0.33
RNF4-222ENST00000541204 FAM155BO75949 473 aa13□□□□□ -0.33
RNF4-222ENST00000541204 INHBAP08476 426 aa13□□□□□ -0.33
RNF4-222ENST00000541204 PDGFRBP09619 1106 aa13□□□□□ -0.33
RNF4-222ENST00000541204 DLDP09622 509 aaKnown RBP13□□□□□ -0.33
RNF4-222ENST00000541204 SMIM10L2AP0DMW4 78 aa13□□□□□ -0.33
RNF4-222ENST00000541204 SMIM10L2BP0DMW5 78 aa13□□□□□ -0.33
RNF4-222ENST00000541204 VDRP11473 427 aa13□□□□□ -0.33
RNF4-222ENST00000541204 YWHAGP61981 247 aaKnown RBP eCLIP13□□□□□ -0.33
RNF4-222ENST00000541204 CDK16Q00536 496 aa13□□□□□ -0.33
RNF4-222ENST00000541204 BEX3Q00994 111 aa13□□□□□ -0.33
RNF4-222ENST00000541204 HIC1Q14526 733 aa13□□□□□ -0.33
RNF4-222ENST00000541204 KPNB1Q14974 876 aaKnown RBP13□□□□□ -0.33
RNF4-222ENST00000541204 CCL14Q16627 93 aa13□□□□□ -0.33
RNF4-222ENST00000541204 MUM1Q2TAK8 710 aa13□□□□□ -0.33
RNF4-222ENST00000541204 SPRYD7Q5W111 196 aa13□□□□□ -0.33
RNF4-222ENST00000541204 TRNP1Q6NT89 227 aa13□□□□□ -0.33
RNF4-222ENST00000541204 FAM183BPQ6ZVS7 135 aa13□□□□□ -0.33
RNF4-222ENST00000541204 ANKRD23Q86SG2 305 aa13□□□□□ -0.33
RNF4-222ENST00000541204 TTC7BQ86TV6 843 aa13□□□□□ -0.33
RNF4-222ENST00000541204 IFNLR1Q8IU57 520 aaPredicted RBP13□□□□□ -0.33
RNF4-222ENST00000541204 SCUBE3Q8IX30 993 aa13□□□□□ -0.33
RNF4-222ENST00000541204 SH3TC2Q8TF17 1288 aa13□□□□□ -0.33
RNF4-222ENST00000541204 SKA1Q96BD8 255 aa13□□□□□ -0.33
RNF4-222ENST00000541204 PARK7Q99497 189 aaKnown RBP13□□□□□ -0.33
RNF4-222ENST00000541204 NT5C1AQ9BXI3 368 aa13□□□□□ -0.33
RNF4-222ENST00000541204 GPATCH2LQ9NWQ4 482 aa13□□□□□ -0.33
RNF4-222ENST00000541204 USP18Q9UMW8 372 aa13□□□□□ -0.33
RNF4-222ENST00000541204 ANK1P16157 1881 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 DPPA5A6NC42 116 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 APOC4-APOC2K7ER74 178 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 MCF2LO15068 1137 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 APOC2P02655 101 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 DHRS4L1P0CG22 281 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 CYP2C9P11712 490 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 PDGFRAP16234 1089 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 NEK3P51956 506 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 RCN1Q15293 331 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 CCDC6Q16204 474 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 TAZQ16635 292 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 OR6B3Q8NGW1 331 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 RXFP2Q8WXD0 754 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 APOPT1Q96IL0 206 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 PEBP4Q96S96 227 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 B3GNT5Q9BYG0 378 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 FRMD8P1Q9BZ68 369 aaPredicted RBP12.99□□□□□ -0.33
RNF4-222ENST00000541204 YIPF3Q9GZM5 350 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 DPEP3Q9H4B8 488 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 CYP3A43Q9HB55 503 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.99□□□□□ -0.33
RNF4-222ENST00000541204 FLRT1Q9NZU1 646 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 ARMCX1Q9P291 453 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 RPL26L1Q9UNX3 145 aaKnown RBP12.99□□□□□ -0.33
RNF4-222ENST00000541204 C2CD2Q9Y426 696 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 COL1A2P08123 1366 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 FAM237BA0A1B0GVD1 139 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 KRT36O76013 467 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 LMNAP02545 664 aaKnown RBP12.99□□□□□ -0.33
RNF4-222ENST00000541204 HMGCRP04035 888 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 MYL2P10916 166 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 ACSBG2Q5FVE4 666 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 OLFML2BQ68BL8 750 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 PMF1Q6P1K2 205 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 SH2D5Q6ZV89 423 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 PRPF39Q86UA1 669 aaKnown RBP12.99□□□□□ -0.33
RNF4-222ENST00000541204 LMNTD2Q8IXW0 634 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 C2orf69Q8N8R5 385 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 TMEM40Q8WWA1 233 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 SLC44A1Q8WWI5 657 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 MCUR1Q96AQ8 359 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 GCOM2Q9BZD3 368 aaPredicted RBP12.99□□□□□ -0.33
RNF4-222ENST00000541204 ADAMTS10Q9H324 1103 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 GOLGA2P5Q9HBQ8 144 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 NMRK1Q9NWW6 199 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 GJD2Q9UKL4 321 aa12.99□□□□□ -0.33
RNF4-222ENST00000541204 PIN4Q9Y237 131 aaKnown RBP12.99□□□□□ -0.33
RNF4-222ENST00000541204 MTO1Q9Y2Z2 717 aaKnown RBP12.99□□□□□ -0.33
RNF4-222ENST00000541204 ACADSP16219 412 aa12.98□□□□□ -0.33
RNF4-222ENST00000541204 GRM5P41594 1212 aa12.98□□□□□ -0.33
RNF4-222ENST00000541204 TUBP50607 506 aa12.98□□□□□ -0.33
RNF4-222ENST00000541204 TSNAXIP1Q2TAA8 658 aa12.98□□□□□ -0.33
RNF4-222ENST00000541204 DARS2Q6PI48 645 aaKnown RBP12.98□□□□□ -0.33
RNF4-222ENST00000541204 CDHR3Q6ZTQ4 885 aa12.98□□□□□ -0.33
RNF4-222ENST00000541204 ZNF467Q7Z7K2 595 aaPredicted RBP12.98□□□□□ -0.33
RNF4-222ENST00000541204 CHSY1Q86X52 802 aa12.98□□□□□ -0.33
RNF4-222ENST00000541204 VPS52Q8N1B4 723 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms