RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 BCCIPQ9P287 314 aaKnown RBP eCLIP15.23■□□□□ 0.03
MSRB3-209ENST00000540804 MBD1Q9UIS9 605 aaPredicted RBP15.23■□□□□ 0.03
MSRB3-209ENST00000540804 RASAL2Q9UJF2 1139 aa15.23■□□□□ 0.03
MSRB3-209ENST00000540804 GOLGA6L4A6NEF3 574 aa15.22■□□□□ 0.03
MSRB3-209ENST00000540804 PRRT4C9JH25 899 aa15.22■□□□□ 0.03
MSRB3-209ENST00000540804 TM4SF5O14894 197 aa15.22■□□□□ 0.03
MSRB3-209ENST00000540804 CALCAP01258 141 aa15.22■□□□□ 0.03
MSRB3-209ENST00000540804 TRIM21P19474 475 aaKnown RBP15.22■□□□□ 0.03
MSRB3-209ENST00000540804 P2RY2P41231 377 aa15.22■□□□□ 0.03
MSRB3-209ENST00000540804 PLA2G4AP47712 749 aa15.22■□□□□ 0.03
MSRB3-209ENST00000540804 DHPSP49366 369 aaPredicted RBP15.22■□□□□ 0.03
MSRB3-209ENST00000540804 EFEMP1Q12805 493 aa15.22■□□□□ 0.03
MSRB3-209ENST00000540804 GOLGA7BQ2TAP0 167 aa15.22■□□□□ 0.03
MSRB3-209ENST00000540804 IL31Q6EBC2 164 aa15.22■□□□□ 0.03
MSRB3-209ENST00000540804 GRAMD4Q6IC98 578 aa15.22■□□□□ 0.03
MSRB3-209ENST00000540804 Q6ZNB5 142 aa15.22■□□□□ 0.03
MSRB3-209ENST00000540804 PGBD3Q8N328 593 aa15.22■□□□□ 0.03
MSRB3-209ENST00000540804 DEFB119Q8N690 84 aa15.22■□□□□ 0.03
MSRB3-209ENST00000540804 SMARCE1Q969G3 411 aa15.22■□□□□ 0.03
MSRB3-209ENST00000540804 GSDMAQ96QA5 445 aa15.22■□□□□ 0.03
MSRB3-209ENST00000540804 TSG101Q99816 390 aa15.22■□□□□ 0.03
MSRB3-209ENST00000540804 DUSP9Q99956 384 aaKnown RBP15.22■□□□□ 0.03
MSRB3-209ENST00000540804 SLC6A17Q9H1V8 727 aa15.22■□□□□ 0.03
MSRB3-209ENST00000540804 POLMQ9NP87 494 aaPredicted RBP15.22■□□□□ 0.03
MSRB3-209ENST00000540804 DNMT3LQ9UJW3 386 aa15.22■□□□□ 0.03
MSRB3-209ENST00000540804 LSM7Q9UK45 103 aaKnown RBP15.22■□□□□ 0.03
MSRB3-209ENST00000540804 RAD54BQ9Y620 910 aa15.22■□□□□ 0.03
MSRB3-209ENST00000540804 A0A1W2PQF6 199 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 WASH3PC4AMC7 463 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 CACNG3O60359 315 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 STX10O60499 249 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 ALDH1A2O94788 518 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 ADRB1P08588 477 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 CISD3P0C7P0 127 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 GABRG2P18507 467 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 PTGER3P43115 390 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 FKBP3Q00688 224 aaKnown RBP15.21■□□□□ 0.03
MSRB3-209ENST00000540804 PDE4CQ08493 712 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 CUL2Q13617 745 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 MAP7D1Q3KQU3 841 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 COBLL1Q53SF7 1204 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 RAB41Q5JT25 222 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 ARHGAP17Q68EM7 881 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 KIAA1211LQ6NV74 962 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 BHLHA9Q7RTU4 235 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 UBA3Q8TBC4 463 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 PIGKQ92643 395 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 KAT5Q92993 513 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 SLC35C1Q96A29 364 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 EDEM2Q9BV94 578 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 ULBP1Q9BZM6 244 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 CD93Q9NPY3 652 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 MAN1B1Q9UKM7 699 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 COQ4Q9Y3A0 265 aa15.21■□□□□ 0.03
MSRB3-209ENST00000540804 ATXN2Q99700 1313 aaKnown RBP15.2■□□□□ 0.02
MSRB3-209ENST00000540804 SLC16A3O15427 465 aaKnown RBP15.2■□□□□ 0.02
MSRB3-209ENST00000540804 GADD45BO75293 160 aaPredicted RBP15.2■□□□□ 0.02
MSRB3-209ENST00000540804 SMC2O95347 1197 aa15.2■□□□□ 0.02
MSRB3-209ENST00000540804 RALAP11233 206 aa15.2■□□□□ 0.02
MSRB3-209ENST00000540804 HOXB2P14652 356 aa15.2■□□□□ 0.02
MSRB3-209ENST00000540804 BMP6P22004 513 aa15.2■□□□□ 0.02
MSRB3-209ENST00000540804 TKTL1P51854 596 aa15.2■□□□□ 0.02
MSRB3-209ENST00000540804 LIMK1P53667 647 aa15.2■□□□□ 0.02
MSRB3-209ENST00000540804 YWHAGP61981 247 aaKnown RBP eCLIP15.2■□□□□ 0.02
MSRB3-209ENST00000540804 RNF43Q68DV7 783 aa15.2■□□□□ 0.02
MSRB3-209ENST00000540804 KLHDC10Q6PID8 442 aa15.2■□□□□ 0.02
MSRB3-209ENST00000540804 CYP2U1Q7Z449 544 aa15.2■□□□□ 0.02
MSRB3-209ENST00000540804 UBR7Q8N806 425 aa15.2■□□□□ 0.02
MSRB3-209ENST00000540804 ANKRD52Q8NB46 1076 aa15.2■□□□□ 0.02
MSRB3-209ENST00000540804 CCDC34Q96HJ3 373 aa15.2■□□□□ 0.02
MSRB3-209ENST00000540804 XPO6Q96QU8 1125 aaKnown RBP15.2■□□□□ 0.02
MSRB3-209ENST00000540804 FSCN3Q9NQT6 498 aa15.2■□□□□ 0.02
MSRB3-209ENST00000540804 TMEM74BQ9NUR3 256 aa15.2■□□□□ 0.02
MSRB3-209ENST00000540804 CACNA2D2Q9NY47 1150 aa15.2■□□□□ 0.02
MSRB3-209ENST00000540804 CLIC5Q9NZA1 410 aa15.2■□□□□ 0.02
MSRB3-209ENST00000540804 MARK1Q9P0L2 795 aa15.2■□□□□ 0.02
MSRB3-209ENST00000540804 ARMCX3Q9UH62 379 aaPredicted RBP15.2■□□□□ 0.02
MSRB3-209ENST00000540804 TSPAN16Q9UKR8 245 aa15.2■□□□□ 0.02
MSRB3-209ENST00000540804 CLEC4EQ9ULY5 219 aa15.2■□□□□ 0.02
MSRB3-209ENST00000540804 NCOR2Q9Y618 2525 aa15.2■□□□□ 0.02
MSRB3-209ENST00000540804 SLC12A8A0AV02 714 aa15.19■□□□□ 0.02
MSRB3-209ENST00000540804 LNP1A1A4G5 178 aa15.19■□□□□ 0.02
MSRB3-209ENST00000540804 C4orf47A7E2U8 309 aa15.19■□□□□ 0.02
MSRB3-209ENST00000540804 RNF225M0QZC1 329 aaPredicted RBP15.19■□□□□ 0.02
MSRB3-209ENST00000540804 PIK3R2O00459 728 aa15.19■□□□□ 0.02
MSRB3-209ENST00000540804 MAP3K13O43283 966 aa15.19■□□□□ 0.02
MSRB3-209ENST00000540804 FOXD2O60548 495 aaPredicted RBP15.19■□□□□ 0.02
MSRB3-209ENST00000540804 CD19P15391 556 aa15.19■□□□□ 0.02
MSRB3-209ENST00000540804 NTSR1P30989 418 aa15.19■□□□□ 0.02
MSRB3-209ENST00000540804 CORO1AP31146 461 aaKnown RBP15.19■□□□□ 0.02
MSRB3-209ENST00000540804 DGKGP49619 791 aa15.19■□□□□ 0.02
MSRB3-209ENST00000540804 IRX4P78413 519 aa15.19■□□□□ 0.02
MSRB3-209ENST00000540804 NUCB2P80303 420 aa15.19■□□□□ 0.02
MSRB3-209ENST00000540804 GOLGA8FQ08AF8 430 aa15.19■□□□□ 0.02
MSRB3-209ENST00000540804 GOLGA8DPQ0D2H9 430 aa15.19■□□□□ 0.02
MSRB3-209ENST00000540804 BECN1Q14457 450 aa15.19■□□□□ 0.02
MSRB3-209ENST00000540804 HSF5Q4G112 596 aaPredicted RBP15.19■□□□□ 0.02
MSRB3-209ENST00000540804 N4BP2L1Q5TBK1 243 aaPredicted RBP15.19■□□□□ 0.02
MSRB3-209ENST00000540804 KLHL10Q6JEL2 608 aa15.19■□□□□ 0.02
MSRB3-209ENST00000540804 DENND1CQ8IV53 801 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms