RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 MRPS5P82675 430 aaKnown RBP9.92□□□□□ -0.82
LCOR-209ENST00000540664 SLC10A2Q12908 348 aaPredicted RBP9.92□□□□□ -0.82
LCOR-209ENST00000540664 PKN2Q16513 984 aaKnown RBP9.92□□□□□ -0.82
LCOR-209ENST00000540664 WSCD1Q658N2 575 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 CLEC20AQ6ZU45 233 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 C3orf62Q6ZUJ4 267 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 MRPL10Q7Z7H8 261 aaKnown RBP9.92□□□□□ -0.82
LCOR-209ENST00000540664 IGDCC3Q8IVU1 814 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 CDKL3Q8IVW4 592 aaPredicted RBP9.92□□□□□ -0.82
LCOR-209ENST00000540664 CCDC185Q8N715 623 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 MGARPQ8TDB4 240 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 CCT6BQ92526 530 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 CSPG4P5Q96PW8 444 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 SLC2A13Q96QE2 648 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 ARHGAP39Q9C0H5 1083 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 NSRP1Q9H0G5 558 aaKnown RBP9.92□□□□□ -0.82
LCOR-209ENST00000540664 TRABDQ9H4I3 376 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 SMG5Q9UPR3 1016 aaKnown RBP9.92□□□□□ -0.82
LCOR-209ENST00000540664 TCP11X1B4DZS4 312 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 M0QZ92 97 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 TYROBPO43914 113 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 GCATO75600 419 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 BEST1O76090 585 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 ZBED1O96006 694 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 C1QAP02745 245 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 VIMP08670 466 aaKnown RBP9.92□□□□□ -0.82
LCOR-209ENST00000540664 GHRP10912 638 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 NOS2P35228 1153 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 FCGRTP55899 365 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 ADIGQ0VDE8 80 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 BBS9Q3SYG4 887 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 SLC45A4Q5BKX6 768 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 PPP6R3Q5H9R7 873 aaPredicted RBP9.92□□□□□ -0.82
LCOR-209ENST00000540664 GNASQ5JWF2 1037 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 RSPH3Q86UC2 560 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 DEFB106AQ8N104 65 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 TMEM86AQ8N2M4 240 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 AGGF1Q8N302 714 aaeCLIP9.92□□□□□ -0.82
LCOR-209ENST00000540664 ANKRD42Q8N9B4 389 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 MCUQ8NE86 351 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 FBF1Q8TES7 1133 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 DCAKDQ8WVC6 231 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 DYDC1Q8WWB3 177 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 TRIB2Q92519 343 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 SENP8Q96LD8 212 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 OLFM3Q96PB7 478 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 QKIQ96PU8 341 aaKnown RBP eCLIP9.92□□□□□ -0.826e-7■■■■■ 47.2
LCOR-209ENST00000540664 NPY6RQ99463 290 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 MAGEB5Q9BZ81 275 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 KDM4CQ9H3R0 1056 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 DHX35Q9H5Z1 703 aaKnown RBP9.92□□□□□ -0.82
LCOR-209ENST00000540664 PNPLA8Q9NP80 782 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 CRTAC1Q9NQ79 661 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 ETNK2Q9NVF9 386 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 NKIRAS1Q9NYS0 192 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 FZD10Q9ULW2 581 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 HEY1Q9Y5J3 304 aa9.92□□□□□ -0.82
LCOR-209ENST00000540664 ADAMTS4O75173 837 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 SPAG6O75602 509 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 DGKIO75912 1065 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 MLH1P40692 756 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 ELK3P41970 407 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 MAGEA3P43357 314 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 LIG3P49916 1009 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 SLC8A3P57103 927 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 YWHAZP63104 245 aaKnown RBP9.91□□□□□ -0.82
LCOR-209ENST00000540664 GBE1Q04446 702 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 ACTN3Q08043 901 aaPredicted RBP9.91□□□□□ -0.82
LCOR-209ENST00000540664 EFTUD2Q15029 972 aaKnown RBP eCLIP9.91□□□□□ -0.822e-6■■■□□ 17.3
LCOR-209ENST00000540664 NCBP2-AS2Q69YL0 99 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 CXCL17Q6UXB2 119 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 RGS9BPQ6ZS82 235 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 CAPN12Q6ZSI9 719 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 CCDC121Q6ZUS5 278 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 TAB3Q8N5C8 712 aaPredicted RBP9.91□□□□□ -0.82
LCOR-209ENST00000540664 PAFAH2Q99487 392 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 ACTR5Q9H9F9 607 aaPredicted RBP9.91□□□□□ -0.82
LCOR-209ENST00000540664 RAB6BQ9NRW1 208 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 MIOSQ9NXC5 875 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 SAMD15Q9P1V8 674 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 GABRQQ9UN88 632 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 GIT1Q9Y2X7 761 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 SF3B1O75533 1304 aaKnown RBP eCLIP9.91□□□□□ -0.827e-6■■■■■ 28.7
LCOR-209ENST00000540664 GOLGA6L7A0A1B0GV03 622 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 CCT8L1PA6NM43 557 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 CLDN5O00501 218 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 ZNF623O75123 536 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 THP07101 528 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 TAC1P20366 129 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 ACAT1P24752 427 aaKnown RBP9.91□□□□□ -0.82
LCOR-209ENST00000540664 STX2P32856 288 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 LHX1P48742 406 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 SULT1E1P49888 294 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 AFF1P51825 1210 aaKnown RBP9.91□□□□□ -0.82
LCOR-209ENST00000540664 SPRED3Q2MJR0 410 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 RAB41Q5JT25 222 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 RNF187Q5TA31 235 aaPredicted RBP9.91□□□□□ -0.82
LCOR-209ENST00000540664 MFSD14CQ5VZR4 134 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 AGMOQ6ZNB7 445 aa9.91□□□□□ -0.82
LCOR-209ENST00000540664 PAXIP1Q6ZW49 1069 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms