RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 RSAD1Q9HA92 442 aa14.65□□□□□ -0.06
INO80E-203ENST00000540562 KCNK13Q9HB14 408 aa14.65□□□□□ -0.06
INO80E-203ENST00000540562 DPP3Q9NY33 737 aa14.65□□□□□ -0.06
INO80E-203ENST00000540562 PCDHGC3Q9UN70 934 aa14.65□□□□□ -0.06
INO80E-203ENST00000540562 ARID2Q68CP9 1835 aa14.65□□□□□ -0.06
INO80E-203ENST00000540562 IGKV6D-21A0A0A0MT36 114 aa14.65□□□□□ -0.06
INO80E-203ENST00000540562 APOL1O14791 398 aa14.65□□□□□ -0.06
INO80E-203ENST00000540562 ACAT1P24752 427 aaKnown RBP14.65□□□□□ -0.06
INO80E-203ENST00000540562 OAZ1P54368 228 aa14.65□□□□□ -0.06
INO80E-203ENST00000540562 EPHB1P54762 984 aa14.65□□□□□ -0.06
INO80E-203ENST00000540562 CELF3Q5SZQ8 465 aaKnown RBP14.65□□□□□ -0.06
INO80E-203ENST00000540562 PQLC3Q8N755 202 aa14.65□□□□□ -0.06
INO80E-203ENST00000540562 TTC13Q8NBP0 860 aa14.65□□□□□ -0.06
INO80E-203ENST00000540562 CFAP61Q8NHU2 1237 aa14.65□□□□□ -0.06
INO80E-203ENST00000540562 PGBD4Q96DM1 585 aa14.65□□□□□ -0.06
INO80E-203ENST00000540562 RNF157Q96PX1 679 aa14.65□□□□□ -0.06
INO80E-203ENST00000540562 TRIM6Q9C030 488 aaPredicted RBP14.65□□□□□ -0.06
INO80E-203ENST00000540562 TAS2R1Q9NYW7 299 aa14.65□□□□□ -0.06
INO80E-203ENST00000540562 SENP1Q9P0U3 644 aa14.65□□□□□ -0.06
INO80E-203ENST00000540562 KCNK1O00180 336 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 PTPN4P29074 926 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 AP1B1Q10567 949 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 NME3Q13232 169 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 UNC5AQ6ZN44 842 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 CYP4V2Q6ZWL3 525 aaPredicted RBP14.64□□□□□ -0.07
INO80E-203ENST00000540562 CAND1Q86VP6 1230 aaKnown RBP14.64□□□□□ -0.07
INO80E-203ENST00000540562 TDRPQ86YL5 185 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 CCDC185Q8N715 623 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 CHST13Q8NET6 341 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 MAGEC3Q8TD91 643 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 AZIN2Q96A70 460 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 LENG1Q96BZ8 264 aaPredicted RBP14.64□□□□□ -0.07
INO80E-203ENST00000540562 APOPT1Q96IL0 206 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 MGAMO43451 1857 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 SPDYE5A6NIY4 337 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 C2CD4BA6NLJ0 364 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 I3L4J1 428 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 C2CD2LO14523 706 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 GOT1P17174 413 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 IL4RP24394 825 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 CYP2F1P24903 491 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 LMO2P25791 158 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 ADCYAP1R1P41586 468 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 ZNF143P52747 638 aaPredicted RBP14.64□□□□□ -0.07
INO80E-203ENST00000540562 NOMO1Q15155 1222 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 CTC1Q2NKJ3 1217 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 KCNT2Q6UVM3 1135 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 TSHZ1Q6ZSZ6 1077 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 CMASQ8NFW8 434 aaPredicted RBP14.64□□□□□ -0.07
INO80E-203ENST00000540562 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.64□□□□□ -0.071e-7■□□□□ 11.1
INO80E-203ENST00000540562 ZNF518BQ9C0D4 1074 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 PDZD7Q9H5P4 517 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 UBP1Q9NZI7 540 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 TEX264Q9Y6I9 313 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 PHIPQ8WWQ0 1821 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.64□□□□□ -0.07
INO80E-203ENST00000540562 ARHGAP42A6NI28 874 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 UBTFL6P0CB48 400 aaPredicted RBP14.64□□□□□ -0.07
INO80E-203ENST00000540562 PGM1P36871 562 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 CCNHP51946 323 aaPredicted RBP14.64□□□□□ -0.07
INO80E-203ENST00000540562 MRPS5P82675 430 aaKnown RBP14.64□□□□□ -0.07
INO80E-203ENST00000540562 CAPRIN2Q6IMN6 1127 aaKnown RBP14.64□□□□□ -0.07
INO80E-203ENST00000540562 TNS4Q8IZW8 715 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 SLC44A1Q8WWI5 657 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 STMN2Q93045 179 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 OXNAD1Q96HP4 312 aaPredicted RBP14.64□□□□□ -0.07
INO80E-203ENST00000540562 CNPY3Q9BT09 278 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 USP29Q9HBJ7 922 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 PCDH18Q9HCL0 1135 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 MAN1C1Q9NR34 630 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 NME7Q9Y5B8 376 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 PSAT1Q9Y617 370 aa14.64□□□□□ -0.07
INO80E-203ENST00000540562 DCAF8L1A6NGE4 600 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 A8MXQ7 604 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 CLDN5O00501 218 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 MAGEB2O15479 319 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 DLDP09622 509 aaKnown RBP14.63□□□□□ -0.07
INO80E-203ENST00000540562 ICAM3P32942 547 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 MLH1P40692 756 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 TAP1Q03518 808 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 R3HDM1Q15032 1099 aaKnown RBP14.63□□□□□ -0.07
INO80E-203ENST00000540562 IL31Q6EBC2 164 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 C4orf50Q6ZRC1 276 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 CEP128Q6ZU80 1094 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 ZMAT2Q96NC0 199 aaKnown RBP14.63□□□□□ -0.07
INO80E-203ENST00000540562 NT5C1AQ9BXI3 368 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 FOXP3Q9BZS1 431 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 PTPRHQ9HD43 1115 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 NMRK1Q9NWW6 199 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 SCN1AP35498 2009 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 PRR5-ARHGAP8B1AHC4 643 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 GSC2O15499 205 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 PAPSS1O43252 624 aaPredicted RBP14.63□□□□□ -0.07
INO80E-203ENST00000540562 ITM2AO43736 263 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 PDE5AO76074 875 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 ARHGAP8P85298 464 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 KCNJ11Q14654 390 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 SLC45A4Q5BKX6 768 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 SNX30Q5VWJ9 437 aa14.63□□□□□ -0.07
INO80E-203ENST00000540562 CMC1Q7Z7K0 106 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms