RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 PDGFCQ9NRA1 345 aa12.9□□□□□ -0.34
NEK6-213ENST00000540326 FAM49BQ9NUQ9 324 aa12.9□□□□□ -0.34
NEK6-213ENST00000540326 NMRK1Q9NWW6 199 aa12.9□□□□□ -0.34
NEK6-213ENST00000540326 RPL26L1Q9UNX3 145 aaKnown RBP12.9□□□□□ -0.34
NEK6-213ENST00000540326 H3BRJ5 948 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 APOEP02649 317 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 VTNP04004 478 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 ENO1P06733 434 aaKnown RBP12.89□□□□□ -0.35
NEK6-213ENST00000540326 ATICP31939 592 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 IRX4P78413 519 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 GOLGA7BQ2TAP0 167 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 BOLA3Q53S33 107 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 GJC2Q5T442 439 aaPredicted RBP12.89□□□□□ -0.35
NEK6-213ENST00000540326 LCLAT1Q6UWP7 414 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 ZCCHC23Q6ZST2 131 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 TREML1Q86YW5 311 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 NRG4Q8WWG1 115 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 E2F7Q96AV8 911 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 NT5C1AQ9BXI3 368 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 C20orf27Q9GZN8 174 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 MIS12Q9H081 205 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 SMARCAD1Q9H4L7 1026 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 GBA2Q9HCG7 927 aaPredicted RBP12.89□□□□□ -0.35
NEK6-213ENST00000540326 PRMT7Q9NVM4 692 aaPredicted RBP12.89□□□□□ -0.35
NEK6-213ENST00000540326 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.89□□□□□ -0.35
NEK6-213ENST00000540326 WDR90Q96KV7 1748 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 POLR2AP24928 1970 aaKnown RBP12.89□□□□□ -0.35
NEK6-213ENST00000540326 CAPN9O14815 690 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 KLF11O14901 512 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 LMNAP02545 664 aaKnown RBP12.89□□□□□ -0.35
NEK6-213ENST00000540326 TXNP10599 105 aaKnown RBP12.89□□□□□ -0.35
NEK6-213ENST00000540326 RARBP10826 455 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 ARF4P18085 180 aaPredicted RBP12.89□□□□□ -0.35
NEK6-213ENST00000540326 PRKCHP24723 683 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 SDC4P31431 198 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 ATXN1P54253 815 aaKnown RBP12.89□□□□□ -0.35
NEK6-213ENST00000540326 GBE1Q04446 702 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 RCN2Q14257 317 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 PDK2Q15119 407 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 SNX30Q5VWJ9 437 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 NUDCD3Q8IVD9 361 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 NDUFAF2Q8N183 169 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 TEX9Q8N6V9 391 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 SH3TC2Q8TF17 1288 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 RTP4Q96DX8 246 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 TXNRD2Q9NNW7 524 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 ARHGEF4Q9NR80 690 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 DPP3Q9NY33 737 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 STOML1Q9UBI4 398 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 PPARGC1AQ9UBK2 798 aaKnown RBP12.89□□□□□ -0.35
NEK6-213ENST00000540326 CORO1CQ9ULV4 474 aaPredicted RBP12.89□□□□□ -0.35
NEK6-213ENST00000540326 AKT3Q9Y243 479 aa12.89□□□□□ -0.35
NEK6-213ENST00000540326 HMX2A2RU54 273 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 B2RBV5 119 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 NVLO15381 856 aaKnown RBP12.88□□□□□ -0.35
NEK6-213ENST00000540326 HBP1O60381 514 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 TBX10O75333 385 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 C22orf31O95567 290 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 INSRRP14616 1297 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 TGM2P21980 687 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 PHKA2P46019 1235 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 KDSRQ06136 332 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 KRT72Q14CN4 511 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 AMHR2Q16671 573 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 TSNAXIP1Q2TAA8 658 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 LGSNQ5TDP6 509 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 SLC9A4Q6AI14 798 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 OLFML1Q6UWY5 402 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 ACOT1Q86TX2 421 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 TTC30AQ86WT1 665 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 UNC5BQ8IZJ1 945 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.88□□□□□ -0.35
NEK6-213ENST00000540326 PDCD7Q8N8D1 485 aaKnown RBP12.88□□□□□ -0.35
NEK6-213ENST00000540326 LPIN3Q9BQK8 851 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 CXCL16Q9H2A7 254 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 ASB7Q9H672 318 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 VRTNQ9H8Y1 702 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 ZFATQ9P243 1243 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 ZNF180Q9UJW8 692 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 BCLAF3A2AJT9 711 aaKnown RBP12.88□□□□□ -0.35
NEK6-213ENST00000540326 IRF6O14896 467 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 KRT38O76015 456 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 MCF2P10911 925 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 PGM1P36871 562 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 PEX19P40855 299 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 AQP5P55064 265 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 INCA1Q0VD86 236 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 SLC10A2Q12908 348 aaPredicted RBP12.88□□□□□ -0.35
NEK6-213ENST00000540326 THOC5Q13769 683 aaKnown RBP12.88□□□□□ -0.35
NEK6-213ENST00000540326 SMAD1Q15797 465 aaKnown RBP12.88□□□□□ -0.35
NEK6-213ENST00000540326 Q3C1V9 767 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 ZNF534Q76KX8 674 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 KHSRPQ92945 711 aaKnown RBP eCLIP12.88□□□□□ -0.356e-8■■■■■ 28.3
NEK6-213ENST00000540326 SIGLEC10Q96LC7 697 aa12.88□□□□□ -0.35
NEK6-213ENST00000540326 PIH1D1Q9NWS0 290 aaKnown RBP12.88□□□□□ -0.35
NEK6-213ENST00000540326 TRDMT1O14717 391 aaKnown RBP12.87□□□□□ -0.35
NEK6-213ENST00000540326 LIN7AO14910 233 aaPredicted RBP12.87□□□□□ -0.35
NEK6-213ENST00000540326 PSMG1O95456 288 aa12.87□□□□□ -0.35
NEK6-213ENST00000540326 IL1BP01584 269 aa12.87□□□□□ -0.35
NEK6-213ENST00000540326 CYP2F1P24903 491 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms