RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 ARHGAP18Q8N392 663 aa15.79■□□□□ 0.12
UBE3B-212ENST00000540230 FAM81BQ96LP2 452 aa15.79■□□□□ 0.12
UBE3B-212ENST00000540230 LSM14BQ9BX40 385 aaKnown RBP15.79■□□□□ 0.12
UBE3B-212ENST00000540230 MIS12Q9H081 205 aa15.79■□□□□ 0.12
UBE3B-212ENST00000540230 CNGB3Q9NQW8 809 aa15.79■□□□□ 0.12
UBE3B-212ENST00000540230 TJP2Q9UDY2 1190 aa15.79■□□□□ 0.12
UBE3B-212ENST00000540230 DRD1P21728 446 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 CLCN1P35523 988 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 RPL34P49207 117 aaKnown RBP15.78■□□□□ 0.12
UBE3B-212ENST00000540230 DMWDQ09019 674 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 ANO6Q4KMQ2 910 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 KLHDC7AQ5VTJ3 777 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 BTBD8Q5XKL5 378 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 MAMSTRQ6ZN01 415 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 RSRC2Q7L4I2 434 aaKnown RBP15.78■□□□□ 0.12
UBE3B-212ENST00000540230 SLC47A2Q86VL8 602 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 SCML4Q8N228 414 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 SPEM1Q8N4L4 309 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 AOPEPQ8N6M6 819 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 OTUB2Q96DC9 234 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 HSFY1Q96LI6 401 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 IER2Q9BTL4 223 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 NAA15Q9BXJ9 866 aaKnown RBP15.78■□□□□ 0.12
UBE3B-212ENST00000540230 SPHK2Q9NRA0 654 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 MARCH2Q9P0N8 246 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 SFMBT1Q9UHJ3 866 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 PIEZO1Q92508 2521 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 SLC12A8A0AV02 714 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 PROB1E7EW31 1015 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 K7ESF4 209 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 TRIM24O15164 1050 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 ADH1CP00326 375 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 ZNF18P17022 549 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 CXCL12P48061 93 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 CCR3P51677 355 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 RAPGEF1Q13905 1077 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 DRAP1Q14919 205 aaPredicted RBP15.78■□□□□ 0.12
UBE3B-212ENST00000540230 ZNF528Q3MIS6 628 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 ASCL5Q7RTU5 278 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 APTXQ7Z2E3 356 aaKnown RBP15.78■□□□□ 0.12
UBE3B-212ENST00000540230 TADA2BQ86TJ2 420 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 PASD1Q8IV76 773 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 ETFBKMTQ8IXQ9 262 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 SYNPOQ8N3V7 929 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 WDTC1Q8N5D0 677 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 NAT16Q8N8M0 369 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 NELL1Q92832 810 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 CDK5RAP1Q96SZ6 601 aaKnown RBP15.78■□□□□ 0.12
UBE3B-212ENST00000540230 GANQ9H2C0 597 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 ST7Q9NRC1 585 aa15.78■□□□□ 0.12
UBE3B-212ENST00000540230 LSM7Q9UK45 103 aaKnown RBP15.78■□□□□ 0.12
UBE3B-212ENST00000540230 K7EQS6 105 aa15.77■□□□□ 0.11
UBE3B-212ENST00000540230 EPHB6O15197 1021 aa15.77■□□□□ 0.11
UBE3B-212ENST00000540230 HOXC11O43248 304 aaPredicted RBP15.77■□□□□ 0.11
UBE3B-212ENST00000540230 MSI1O43347 362 aaKnown RBP15.77■□□□□ 0.11
UBE3B-212ENST00000540230 MED7O43513 233 aa15.77■□□□□ 0.11
UBE3B-212ENST00000540230 UCHL3P15374 230 aa15.77■□□□□ 0.11
UBE3B-212ENST00000540230 CORO1AP31146 461 aaKnown RBP15.77■□□□□ 0.11
UBE3B-212ENST00000540230 COPB1P53618 953 aaKnown RBP15.77■□□□□ 0.11
UBE3B-212ENST00000540230 KDSRQ06136 332 aa15.77■□□□□ 0.11
UBE3B-212ENST00000540230 GOLGA8FQ08AF8 430 aa15.77■□□□□ 0.11
UBE3B-212ENST00000540230 GOLGA8DPQ0D2H9 430 aa15.77■□□□□ 0.11
UBE3B-212ENST00000540230 MEA1Q16626 185 aa15.77■□□□□ 0.11
UBE3B-212ENST00000540230 TPGS1Q6ZTW0 290 aa15.77■□□□□ 0.11
UBE3B-212ENST00000540230 FMNL3Q8IVF7 1028 aa15.77■□□□□ 0.11
UBE3B-212ENST00000540230 SCUBE3Q8IX30 993 aa15.77■□□□□ 0.11
UBE3B-212ENST00000540230 FAM71AQ8IYT1 594 aa15.77■□□□□ 0.11
UBE3B-212ENST00000540230 PHTF2Q8N3S3 785 aa15.77■□□□□ 0.11
UBE3B-212ENST00000540230 PIWIL1Q96J94 861 aaKnown RBP15.77■□□□□ 0.11
UBE3B-212ENST00000540230 FUCA2Q9BTY2 467 aa15.77■□□□□ 0.11
UBE3B-212ENST00000540230 SLC4A5Q9BY07 1137 aa15.77■□□□□ 0.11
UBE3B-212ENST00000540230 ABCC13Q9NSE7 274 aa15.77■□□□□ 0.11
UBE3B-212ENST00000540230 ZFHX2Q9C0A1 2572 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-212ENST00000540230 E5RJQ4 531 aa15.76■□□□□ 0.11
UBE3B-212ENST00000540230 PAPSS1O43252 624 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-212ENST00000540230 LTFP02788 710 aa15.76■□□□□ 0.11
UBE3B-212ENST00000540230 FYNP06241 537 aa15.76■□□□□ 0.11
UBE3B-212ENST00000540230 CHRM1P11229 460 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-212ENST00000540230 ATP1A3P13637 1013 aa15.76■□□□□ 0.11
UBE3B-212ENST00000540230 SEC13P55735 322 aa15.76■□□□□ 0.11
UBE3B-212ENST00000540230 COG7P83436 770 aa15.76■□□□□ 0.11
UBE3B-212ENST00000540230 GAD2Q05329 585 aa15.76■□□□□ 0.11
UBE3B-212ENST00000540230 PDCLQ13371 301 aa15.76■□□□□ 0.11
UBE3B-212ENST00000540230 ANO4Q32M45 955 aa15.76■□□□□ 0.11
UBE3B-212ENST00000540230 ZBTB44Q8NCP5 570 aa15.76■□□□□ 0.11
UBE3B-212ENST00000540230 RPLP0P6Q8NHW5 317 aa15.76■□□□□ 0.11
UBE3B-212ENST00000540230 IRGQQ8WZA9 623 aa15.76■□□□□ 0.11
UBE3B-212ENST00000540230 BHMTQ93088 406 aa15.76■□□□□ 0.11
UBE3B-212ENST00000540230 PLCB1Q9NQ66 1216 aa15.76■□□□□ 0.11
UBE3B-212ENST00000540230 LIMA1Q9UHB6 759 aaKnown RBP15.76■□□□□ 0.11
UBE3B-212ENST00000540230 AGO1Q9UL18 857 aaKnown RBP15.76■□□□□ 0.11
UBE3B-212ENST00000540230 SIK3Q9Y2K2 1263 aa15.76■□□□□ 0.11
UBE3B-212ENST00000540230 FRYLO94915 3013 aa15.76■□□□□ 0.11
UBE3B-212ENST00000540230 FAM170AA1A519 330 aa15.75■□□□□ 0.11
UBE3B-212ENST00000540230 PRR23AA6NEV1 266 aa15.75■□□□□ 0.11
UBE3B-212ENST00000540230 NEDD8-MDP1E9PL57 170 aa15.75■□□□□ 0.11
UBE3B-212ENST00000540230 TULP3O75386 442 aa15.75■□□□□ 0.11
UBE3B-212ENST00000540230 EIF2DP41214 584 aaKnown RBP15.75■□□□□ 0.11
UBE3B-212ENST00000540230 PTK2Q05397 1052 aa15.75■□□□□ 0.11
UBE3B-212ENST00000540230 MSANTD2Q6P1R3 559 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms