RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 NKX2-4Q9H2Z4 354 aa9□□□□□ -0.97
DDB1-217ENST00000540166 ADAMTS5Q9UNA0 930 aa9□□□□□ -0.97
DDB1-217ENST00000540166 SGK1O00141 431 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 STK25O00506 426 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 ADCY6O43306 1168 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 T-ENOLP0DO92 83 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 ZNF24P17028 368 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 NCF2P19878 526 aaPredicted RBP8.99□□□□□ -0.97
DDB1-217ENST00000540166 NCKAP1LP55160 1127 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 HDAC4P56524 1084 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 GPS1Q13098 491 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 KLHL38Q2WGJ6 581 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 BBS9Q3SYG4 887 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 UBAP2Q5T6F2 1119 aaKnown RBP8.99□□□□□ -0.97
DDB1-217ENST00000540166 LNX1Q8TBB1 728 aaPredicted RBP8.99□□□□□ -0.97
DDB1-217ENST00000540166 MIPEPQ99797 713 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 FERMT1Q9BQL6 677 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 FOXP3Q9BZS1 431 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 IKZF4Q9H2S9 585 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 ZNF302Q9NR11 478 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 KRT82Q9NSB4 513 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 TAS2R14Q9NYV8 317 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 APOBEC2Q9Y235 224 aaKnown RBP8.99□□□□□ -0.97
DDB1-217ENST00000540166 CCDC195A0A1B0GUA6 201 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 MYADML2A6NDP7 307 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 RFC2P35250 354 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 MXI1P50539 228 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 FOLH1Q04609 750 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 PTPN11Q06124 597 aaPredicted RBP8.99□□□□□ -0.97
DDB1-217ENST00000540166 PGM5Q15124 567 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 OASLQ15646 514 aaKnown RBP8.99□□□□□ -0.97
DDB1-217ENST00000540166 ARSHQ5FYA8 562 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 C11orf63Q6NUN7 778 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 CATSPER1Q8NEC5 780 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 DQX1Q8TE96 717 aaKnown RBP8.99□□□□□ -0.97
DDB1-217ENST00000540166 PPP4R1Q8TF05 950 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 RSPH1Q8WYR4 309 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 GPRASP2Q96D09 838 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 CLPTM1LQ96KA5 538 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 BTBD6Q96KE9 485 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 NACC1Q96RE7 527 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 KIAA1586Q9HCI6 787 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 TBC1D22BQ9NU19 505 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 TUBGCP4Q9UGJ1 667 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 SEPT9Q9UHD8 586 aaPredicted RBP8.99□□□□□ -0.97
DDB1-217ENST00000540166 ZMYM2Q9UBW7 1377 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 MYH1P12882 1939 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 MATN2O00339 956 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 MAGEB3O15480 346 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 MMP3P08254 477 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 FAM58BPP0C7Q3 252 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 CD151P48509 253 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 SLC12A3P55017 1021 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 INHBCP55103 352 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 MARSP56192 900 aaKnown RBP8.99□□□□□ -0.97
DDB1-217ENST00000540166 YWHAGP61981 247 aaKnown RBP eCLIP8.99□□□□□ -0.97
DDB1-217ENST00000540166 DMPKQ09013 629 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 ATP1A4Q13733 1029 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 SLC1A5Q15758 541 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 KIAA1841Q6NSI8 718 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 CGB2Q6NT52 195 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 FIBCD1Q8N539 461 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.99□□□□□ -0.97
DDB1-217ENST00000540166 TCP10LQ8TDR4 215 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 PHF12Q96QT6 1004 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 SLC9A7Q96T83 725 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 INO80BQ9C086 356 aaPredicted RBP8.99□□□□□ -0.97
DDB1-217ENST00000540166 PPCSQ9HAB8 311 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 PCDHB7Q9Y5E2 793 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 ATP9BO43861 1147 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 PDAP1Q13442 181 aaKnown RBP8.99□□□□□ -0.97
DDB1-217ENST00000540166 CEP55Q53EZ4 464 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 CELF3Q5SZQ8 465 aaKnown RBP8.99□□□□□ -0.97
DDB1-217ENST00000540166 DCAF12L1Q5VU92 463 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 PCNX4Q63HM2 1172 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 RINT1Q6NUQ1 792 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 SWSAP1Q6NVH7 229 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 KLHDC10Q6PID8 442 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 PRUNE1Q86TP1 453 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 PASD1Q8IV76 773 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 SLC20A1Q8WUM9 679 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 JADE3Q92613 823 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 VPS50Q96JG6 964 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 FAM111AQ96PZ2 611 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 SERPINI1Q99574 410 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 IGFLR1Q9H665 355 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 LGALS13Q9UHV8 139 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 SOX13Q9UN79 622 aa8.99□□□□□ -0.97
DDB1-217ENST00000540166 CYP26A1O43174 497 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 MAGEC1O60732 1142 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 TOM1L1O75674 476 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 ESRRBO95718 433 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 MX2P20592 715 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 CIITAP33076 1130 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 CTNNB1P35222 781 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 MRPS9P82933 396 aaKnown RBP8.98□□□□□ -0.97
DDB1-217ENST00000540166 PAN2Q504Q3 1202 aaKnown RBP8.98□□□□□ -0.97
DDB1-217ENST00000540166 LIN9Q5TKA1 542 aa8.98□□□□□ -0.97
DDB1-217ENST00000540166 THOC7Q6I9Y2 204 aaKnown RBP8.98□□□□□ -0.97
DDB1-217ENST00000540166 FOXR2Q6PJQ5 311 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms