RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 TMEM92Q6UXU6 159 aa23.34■■□□□ 1.33
SCARB1-206ENST00000539320 C11orf74Q86VG3 221 aa23.34■■□□□ 1.33
SCARB1-206ENST00000539320 TTC30AQ86WT1 665 aa23.34■■□□□ 1.33
SCARB1-206ENST00000539320 ARHGAP18Q8N392 663 aa23.34■■□□□ 1.33
SCARB1-206ENST00000539320 ZNF276Q8N554 614 aa23.34■■□□□ 1.33
SCARB1-206ENST00000539320 BBS2Q9BXC9 721 aa23.34■■□□□ 1.33
SCARB1-206ENST00000539320 UBXN6Q9BZV1 441 aa23.34■■□□□ 1.33
SCARB1-206ENST00000539320 DUSP15Q9H1R2 295 aaPredicted RBP23.34■■□□□ 1.33
SCARB1-206ENST00000539320 DNAJC17Q9NVM6 304 aaKnown RBP23.34■■□□□ 1.33
SCARB1-206ENST00000539320 RASAL2Q9UJF2 1139 aa23.34■■□□□ 1.33
SCARB1-206ENST00000539320 CACNG3O60359 315 aa23.33■■□□□ 1.33
SCARB1-206ENST00000539320 RHOBTB1O94844 696 aa23.33■■□□□ 1.33
SCARB1-206ENST00000539320 TBXAS1P24557 533 aaPredicted RBP23.33■■□□□ 1.33
SCARB1-206ENST00000539320 GBP1P32455 592 aa23.33■■□□□ 1.33
SCARB1-206ENST00000539320 MPLP40238 635 aa23.33■■□□□ 1.33
SCARB1-206ENST00000539320 FMO5P49326 533 aa23.33■■□□□ 1.33
SCARB1-206ENST00000539320 BCAT1P54687 386 aa23.33■■□□□ 1.33
SCARB1-206ENST00000539320 LRMPQ12912 555 aa23.33■■□□□ 1.33
SCARB1-206ENST00000539320 CCDC6Q16204 474 aa23.33■■□□□ 1.33
SCARB1-206ENST00000539320 AASDHQ4L235 1098 aaPredicted RBP23.33■■□□□ 1.33
SCARB1-206ENST00000539320 USP39Q53GS9 565 aaKnown RBP23.33■■□□□ 1.33
SCARB1-206ENST00000539320 SGO2Q562F6 1265 aa23.33■■□□□ 1.33
SCARB1-206ENST00000539320 RAB41Q5JT25 222 aa23.33■■□□□ 1.33
SCARB1-206ENST00000539320 C10orf76Q5T2E6 689 aa23.33■■□□□ 1.33
SCARB1-206ENST00000539320 Q6ZNB5 142 aa23.33■■□□□ 1.33
SCARB1-206ENST00000539320 NUDT18Q6ZVK8 323 aa23.33■■□□□ 1.33
SCARB1-206ENST00000539320 MIB1Q86YT6 1006 aa23.33■■□□□ 1.33
SCARB1-206ENST00000539320 C12orf50Q8NA57 414 aaPredicted RBP23.33■■□□□ 1.33
SCARB1-206ENST00000539320 XPO6Q96QU8 1125 aaKnown RBP23.33■■□□□ 1.33
SCARB1-206ENST00000539320 POLMQ9NP87 494 aaPredicted RBP23.33■■□□□ 1.33
SCARB1-206ENST00000539320 ZDHHC4Q9NPG8 344 aa23.33■■□□□ 1.33
SCARB1-206ENST00000539320 WDR35Q9P2L0 1181 aa23.33■■□□□ 1.33
SCARB1-206ENST00000539320 TSPAN16Q9UKR8 245 aa23.33■■□□□ 1.33
SCARB1-206ENST00000539320 ABCA7Q8IZY2 2146 aa23.33■■□□□ 1.32
SCARB1-206ENST00000539320 STC2O76061 302 aa23.32■■□□□ 1.32
SCARB1-206ENST00000539320 ZNF806P0C7X5 589 aa23.32■■□□□ 1.32
SCARB1-206ENST00000539320 TYRP14679 529 aa23.32■■□□□ 1.32
SCARB1-206ENST00000539320 CD19P15391 556 aa23.32■■□□□ 1.32
SCARB1-206ENST00000539320 SF3A2Q15428 464 aaKnown RBP23.32■■□□□ 1.32
SCARB1-206ENST00000539320 TTI2Q6NXR4 508 aa23.32■■□□□ 1.32
SCARB1-206ENST00000539320 FOXR2Q6PJQ5 311 aa23.32■■□□□ 1.32
SCARB1-206ENST00000539320 TPGS1Q6ZTW0 290 aa23.32■■□□□ 1.32
SCARB1-206ENST00000539320 TRMT11Q7Z4G4 463 aaKnown RBP23.32■■□□□ 1.32
SCARB1-206ENST00000539320 UBR7Q8N806 425 aa23.32■■□□□ 1.32
SCARB1-206ENST00000539320 ZNF513Q8N8E2 541 aaPredicted RBP23.32■■□□□ 1.32
SCARB1-206ENST00000539320 NELFBQ8WX92 580 aa23.32■■□□□ 1.32
SCARB1-206ENST00000539320 HESX1Q9UBX0 185 aa23.32■■□□□ 1.32
SCARB1-206ENST00000539320 CTNND2Q9UQB3 1225 aa23.32■■□□□ 1.32
SCARB1-206ENST00000539320 BICDL2A1A5D9 508 aa23.31■■□□□ 1.32
SCARB1-206ENST00000539320 XPO1O14980 1071 aaKnown RBP23.31■■□□□ 1.32
SCARB1-206ENST00000539320 TRIM24O15164 1050 aa23.31■■□□□ 1.32
SCARB1-206ENST00000539320 GDF9O60383 454 aa23.31■■□□□ 1.32
SCARB1-206ENST00000539320 ADAM23O75077 832 aa23.31■■□□□ 1.32
SCARB1-206ENST00000539320 PDE4CQ08493 712 aa23.31■■□□□ 1.32
SCARB1-206ENST00000539320 BST2Q10589 180 aaKnown RBP23.31■■□□□ 1.32
SCARB1-206ENST00000539320 EFEMP1Q12805 493 aa23.31■■□□□ 1.32
SCARB1-206ENST00000539320 MORC3Q14149 939 aa23.31■■□□□ 1.32
SCARB1-206ENST00000539320 PLA2G2CQ5R387 149 aa23.31■■□□□ 1.32
SCARB1-206ENST00000539320 PMS2CLQ68D20 193 aa23.31■■□□□ 1.32
SCARB1-206ENST00000539320 KCNV2Q8TDN2 545 aa23.31■■□□□ 1.32
SCARB1-206ENST00000539320 NT5C1BQ96P26 610 aa23.31■■□□□ 1.32
SCARB1-206ENST00000539320 ULBP1Q9BZM6 244 aa23.31■■□□□ 1.32
SCARB1-206ENST00000539320 INVSQ9Y283 1065 aa23.31■■□□□ 1.32
SCARB1-206ENST00000539320 DCDC2BA2VCK2 349 aa23.3■■□□□ 1.32
SCARB1-206ENST00000539320 PPP1R3GB7ZBB8 358 aa23.3■■□□□ 1.32
SCARB1-206ENST00000539320 TULP2O00295 520 aa23.3■■□□□ 1.32
SCARB1-206ENST00000539320 PMM2O15305 246 aa23.3■■□□□ 1.32
SCARB1-206ENST00000539320 GADD45BO75293 160 aaPredicted RBP23.3■■□□□ 1.32
SCARB1-206ENST00000539320 BMP6P22004 513 aa23.3■■□□□ 1.32
SCARB1-206ENST00000539320 TKTL1P51854 596 aa23.3■■□□□ 1.32
SCARB1-206ENST00000539320 YWHAGP61981 247 aaKnown RBP eCLIP23.3■■□□□ 1.32
SCARB1-206ENST00000539320 COG7P83436 770 aa23.3■■□□□ 1.32
SCARB1-206ENST00000539320 RSRC2Q7L4I2 434 aaKnown RBP23.3■■□□□ 1.32
SCARB1-206ENST00000539320 OLIG1Q8TAK6 271 aa23.3■■□□□ 1.32
SCARB1-206ENST00000539320 VPS45Q9NRW7 570 aa23.3■■□□□ 1.32
SCARB1-206ENST00000539320 BCCIPQ9P287 314 aaKnown RBP eCLIP23.3■■□□□ 1.32
SCARB1-206ENST00000539320 STRIP2Q9ULQ0 834 aa23.3■■□□□ 1.32
SCARB1-206ENST00000539320 CIZ1Q9ULV3 898 aaPredicted RBP23.3■■□□□ 1.32
SCARB1-206ENST00000539320 ZNF510Q9Y2H8 683 aa23.3■■□□□ 1.32
SCARB1-206ENST00000539320 TCRBV21S2A2A0A5A6 115 aa23.29■■□□□ 1.32
SCARB1-206ENST00000539320 O00370 1275 aa23.29■■□□□ 1.32
SCARB1-206ENST00000539320 BIN1O00499 593 aa23.29■■□□□ 1.32
SCARB1-206ENST00000539320 ZBED1O96006 694 aa23.29■■□□□ 1.32
SCARB1-206ENST00000539320 VDRP11473 427 aa23.29■■□□□ 1.32
SCARB1-206ENST00000539320 BCKDHBP21953 392 aa23.29■■□□□ 1.32
SCARB1-206ENST00000539320 CREB5Q02930 508 aa23.29■■□□□ 1.32
SCARB1-206ENST00000539320 HMGB4Q8WW32 186 aa23.29■■□□□ 1.32
SCARB1-206ENST00000539320 SPACA7Q96KW9 195 aa23.29■■□□□ 1.32
SCARB1-206ENST00000539320 DCLK3Q9C098 648 aa23.29■■□□□ 1.32
SCARB1-206ENST00000539320 SMOC1Q9H4F8 434 aa23.29■■□□□ 1.32
SCARB1-206ENST00000539320 LRRC4Q9HBW1 653 aa23.29■■□□□ 1.32
SCARB1-206ENST00000539320 MARCH2Q9P0N8 246 aa23.29■■□□□ 1.32
SCARB1-206ENST00000539320 STARD13Q9Y3M8 1113 aa23.29■■□□□ 1.32
SCARB1-206ENST00000539320 P4HA2O15460 535 aa23.28■■□□□ 1.32
SCARB1-206ENST00000539320 HMBSP08397 361 aa23.28■■□□□ 1.32
SCARB1-206ENST00000539320 SETSIPP0DME0 302 aa23.28■■□□□ 1.32
SCARB1-206ENST00000539320 CORO1AP31146 461 aaKnown RBP23.28■■□□□ 1.32
SCARB1-206ENST00000539320 LIMK1P53667 647 aa23.28■■□□□ 1.32
SCARB1-206ENST00000539320 ADIGQ0VDE8 80 aa23.28■■□□□ 1.32
SCARB1-206ENST00000539320 CETN1Q12798 172 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms