RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-208	ENST00000538266	TOPORS	Q9NS56	1045 aa	Predicted RBP	4.66	□□□□□ -1.66
SNHG1-208	ENST00000538266	SPTLC3	Q9NUV7	552 aa		4.66	□□□□□ -1.66
SNHG1-208	ENST00000538266	TMEM161A	Q9NX61	479 aa		4.66	□□□□□ -1.66
SNHG1-208	ENST00000538266	CGN	Q9P2M7	1197 aa	Known RBP	4.66	□□□□□ -1.66
SNHG1-208	ENST00000538266	NDOR1	Q9UHB4	597 aa		4.66	□□□□□ -1.66
SNHG1-208	ENST00000538266	MAN1B1	Q9UKM7	699 aa		4.66	□□□□□ -1.66
SNHG1-208	ENST00000538266	GDA	Q9Y2T3	454 aa		4.66	□□□□□ -1.66
SNHG1-208	ENST00000538266	PCDHB2	Q9Y5E7	798 aa		4.66	□□□□□ -1.66
SNHG1-208	ENST00000538266	PCDHA9	Q9Y5H5	950 aa		4.66	□□□□□ -1.66
SNHG1-208	ENST00000538266	MRPL42	Q9Y6G3	142 aa	Known RBP	4.66	□□□□□ -1.66
SNHG1-208	ENST00000538266		X6R8D5	127 aa		4.66	□□□□□ -1.66
SNHG1-208	ENST00000538266	MICAL3	Q7RTP6	2002 aa		4.65	□□□□□ -1.66
SNHG1-208	ENST00000538266		A0A0B4J269	797 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	TEX51	A0A1B0GUA7	166 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266		A0A1W2PPC1	479 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	BICDL2	A1A5D9	508 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	HRK	O00198	91 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	ENPP3	O14638	875 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	PPP1R12A	O14974	1030 aa	Predicted RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	KIAA0391	O15091	583 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	OGT	O15294	1046 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	CALU	O43852	315 aa	Predicted RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	MGEA5	O60502	916 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	DGKI	O75912	1065 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	RECQL4	O94761	1208 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	ASMTL	O95671	621 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	LDHA	P00338	332 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	PIGR	P01833	764 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	CLTA	P09496	248 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	CCDC192	P0DO97	292 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	NAT1	P18440	290 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	RPL13	P26373	211 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	HOXA11	P31270	313 aa	Predicted RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	MLH1	P40692	756 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	PRCP	P42785	496 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	CYP2J2	P51589	502 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	OSTN	P61366	133 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	SNRPF	P62306	86 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	DEFB103A	P81534	67 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	RNASEL	Q05823	741 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	LRRC63	Q05C16	580 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	MCL1	Q07820	350 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	MORC3	Q14149	939 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	SHH	Q15465	462 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	STX1A	Q16623	288 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	TPD52L1	Q16890	204 aa	Predicted RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	BMT2	Q1RMZ1	405 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	C9orf50	Q5SZB4	431 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	C16orf59	Q7L2K0	433 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	TMC6	Q7Z403	805 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	USP37	Q86T82	979 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	CDR2L	Q86X02	465 aa	Predicted RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	ECHDC2	Q86YB7	292 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	HERC6	Q8IVU3	1022 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	THNSL1	Q8IYQ7	743 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	GUF1	Q8N442	669 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	POU5F2	Q8N7G0	328 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	MLKL	Q8NB16	471 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	SLC7A14	Q8TBB6	771 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	PHOSPHO2	Q8TCD6	241 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	URGCP	Q8TCY9	931 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	SCFD1	Q8WVM8	642 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	RSPH1	Q8WYR4	309 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	DHTKD1	Q96HY7	919 aa	Predicted RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	MAGEB10	Q96LZ2	347 aa	Predicted RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	ACAP3	Q96P50	834 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	FIZ1	Q96SL8	496 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	APOL6	Q9BWW8	343 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	STRA6	Q9BX79	667 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	EIF2A	Q9BY44	585 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	MRPL9	Q9BYD2	267 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	FGFBP2	Q9BYJ0	223 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	NAT10	Q9H0A0	1025 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	CDT1	Q9H211	546 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	NXF3	Q9H4D5	531 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	ELAC1	Q9H777	363 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	RSAD1	Q9HA92	442 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	UBN1	Q9NPG3	1134 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	AGPAT3	Q9NRZ7	376 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	RGS18	Q9NS28	235 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	TYW1	Q9NV66	732 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	FANCL	Q9NW38	375 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	PPARGC1A	Q9UBK2	798 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	AGO2	Q9UKV8	859 aa	Known RBP	4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	FRMD4B	Q9Y2L6	1034 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	SIT1	Q9Y3P8	196 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	HES2	Q9Y543	173 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	IPP	Q9Y573	584 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	ZMYM2	Q9UBW7	1377 aa		4.65	□□□□□ -1.67
SNHG1-208	ENST00000538266	TET1	Q8NFU7	2136 aa		4.64	□□□□□ -1.67
SNHG1-208	ENST00000538266	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	4.64	□□□□□ -1.67
SNHG1-208	ENST00000538266	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	4.64	□□□□□ -1.67
SNHG1-208	ENST00000538266	TBKBP1	A7MCY6	615 aa		4.64	□□□□□ -1.67
SNHG1-208	ENST00000538266	TISP43	B9A030	160 aa		4.64	□□□□□ -1.67
SNHG1-208	ENST00000538266	ANKRD63	C9JTQ0	380 aa		4.64	□□□□□ -1.67
SNHG1-208	ENST00000538266	FAM47E-STBD1	D6RA91	191 aa		4.64	□□□□□ -1.67
SNHG1-208	ENST00000538266	ETV2	O00321	342 aa	Predicted RBP	4.64	□□□□□ -1.67

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